Flavobacterium channae: LOS89_08910
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Entry
LOS89_08910 CDS
T08502
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
fcb
Flavobacterium channae
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcb03016
]
LOS89_08910 (mnmE)
Transfer RNA biogenesis [BR:
fcb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LOS89_08910 (mnmE)
Prokaryotic type
Methyltransferases
LOS89_08910 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Arf
DO-GTPase2
Ras
MMR_HSR1_Xtn
Roc
ATP_bind_1
AAA_22
Gtr1_RagA
AAA
GTP_EFTU
cobW
ABC_tran
AAA_15
ABC_ATPase
Guanylate_kin
NOG1
AAA_29
AAA_24
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UGS22891
LinkDB
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Position
1923838..1925250
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AA seq
470 aa
AA seq
DB search
MIPQETIVALATPSGAGAIAIIRLSGKDAITIAAEVFQSVSGKDITKQKTHTIHLGHIVD
PSTSSGQAGKVYDQVLLSIFKGPNSYTGENVIEISCHGSTFIQQQIIQLLLRKGAKMAQA
GEFTLRAFLNGKLDLSQAEAVADLIASDNEASHQIAMQQMRGGFSNEIAKLREELLNFAS
LIELELDFAEEDVEFADRTQFHDLLERIEFVLKRLIDSFAVGNVIKNGIPVAIVGEPNVG
KSTLLNALLNEERAIVSDIAGTTRDTIEDELVIDGIGFRFIDTAGIRETKDVVESIGIQK
TFEKIEQAQVVLFLVDSSKLSVDSLALLKNETEQIKNKYPLKTVVVIANKADLLSLEQKN
TIQATIDNIHFLSAKHKEGIDELKNTLLSFVNTGALRNNETIVTNTRHYDSLLKALEEVQ
KVKWGLDSGLSSDLMAIDIRSALHYFGEITGEVTNDELLGNIFANFCIGK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgattccacaagaaaccatagttgcgttagctacaccgtctggagcgggtgcgattgct
attattcgattatctggtaaagatgctattacgatagctgctgaagtatttcaatcggtt
tcagggaaagatattacgaaacagaagacgcatacgattcacttagggcatattgtagac
ccttcgacaagctcaggacaggctggcaaagtgtacgaccaagtgttactttcgattttc
aaaggcccgaattcgtatacaggggaaaacgtgattgaaatttcgtgtcatggttctact
tttattcaacaacaaatcatccaattattgcttcgtaaaggcgctaaaatggcacaagcg
ggtgaatttactttacgagcctttttaaacgggaaattggacttatcacaagcggaagcg
gtggctgatttgattgcttctgacaatgaagcgagtcaccaaattgcgatgcaacaaatg
cgtggcggtttcagtaacgagattgctaaattgcgtgaagaattattgaattttgcttct
ctaatcgaattagaattagactttgcagaagaagatgtggaatttgccgatagaacacaa
tttcatgatttattggaaagaattgaattcgttttaaaacgtttgattgattcgtttgct
gttggtaacgtaattaaaaacggaattccagtagctattgtaggcgaaccaaatgttgga
aaatcgactttattgaatgctttattgaatgaagaacgcgccattgtttctgacattgca
ggaacaactcgtgatacgattgaagatgaattagtaatcgatggaattggtttccgattt
attgatacggctggaattcgtgaaacaaaggatgtggtggaaagtattggaattcagaag
acatttgagaaaattgagcaagcgcaagtagttcttttcttggttgacagttctaagttg
tctgttgacagtttagctttgctaaaaaatgaaactgaacagattaaaaacaaatatcct
ttaaaaactgttgtagttattgctaataaggctgatttactttcattggaacaaaaaaat
actatacaagctacaatcgacaatatacattttttaagtgctaaacataaagaaggaata
gatgaattaaaaaacactttactctcattcgtaaacactggtgcattaagaaataatgaa
acgattgttaccaatacacgtcactatgattcattattaaaagcattagaagaagtacaa
aaagtaaaatggggattagactcgggactttcttctgacttaatggcgattgatattcgt
tctgctctacactattttggagagattactggagaagttactaacgacgagctcttgggt
aatatatttgcaaacttctgtattgggaagtaa
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