Flavobacterium channae: LOS89_09595
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Entry
LOS89_09595 CDS
T08502
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
fcb
Flavobacterium channae
Pathway
fcb00300
Lysine biosynthesis
fcb00470
D-Amino acid metabolism
fcb01100
Metabolic pathways
fcb01110
Biosynthesis of secondary metabolites
fcb01120
Microbial metabolism in diverse environments
fcb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LOS89_09595 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LOS89_09595 (dapF)
Enzymes [BR:
fcb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LOS89_09595 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
CntK_N
Glycoprotein_B
Caudo_bapla_N
Bac_A_amyl_C
Motif
Other DBs
NCBI-ProteinID:
UGS23017
LinkDB
All DBs
Position
complement(2058549..2059337)
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AA seq
262 aa
AA seq
DB search
MQLTFYKYQGTGNDFVMIDNRSEFFPKNNTKLVEQLCDRRFGIGADGLILLENHPQYDFR
MVYYNSDGNESSMCGNGGRCLVAFAKQMGVVANKAEFEAVDGYHYATVDNEGIVALQMKD
VDTVNQYENYTFLNTGSPHHVQLVDDLVSLDIKTEGAKIRYSDLYGKAGSNVNFVHQLAN
DIFAVRTYERGVEDETLSCGTGVTAVAIAMHQTGKTNNNVIDLNVEGGKLKVQFDVDNGN
YTNVFLIGPATFVFEGKINLDF
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttacattttataaatatcaaggaactggaaacgattttgttatgattgataat
cgtagtgaattttttcccaaaaataataccaaactagttgaacaactttgtgacagaaga
tttggcataggtgctgatggattgatacttttagaaaaccatccgcaatatgattttaga
atggtatattacaattctgatggaaacgaaagtagtatgtgtggtaatggtggtagatgt
ttggtagcttttgcaaaacaaatgggagttgttgctaataaggcagagtttgaagcagta
gatggatatcattacgcaacagttgataatgaaggaattgtagcgcttcaaatgaaagat
gttgatactgttaatcaatatgaaaattatacttttttaaatacaggttcgccacatcat
gtgcaattggttgatgatttagtaagtttggatattaaaactgaaggtgctaaaattcgt
tactctgatttgtatggaaaagcaggaagtaatgttaactttgttcatcaattagcaaat
gacatttttgcagttcgtacttacgagcgaggtgtagaagatgaaactttatcttgtggt
actggtgttactgcggttgcaattgctatgcatcaaacaggaaaaaccaataataatgta
attgatttaaatgttgaaggtggtaaattaaaagtgcaatttgatgttgataatggaaat
tataccaatgtttttttaattggtcccgcaacatttgtttttgaaggaaagattaattta
gatttttga
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