Flavobacterium channae: LOS89_10460
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Entry
LOS89_10460 CDS
T08502
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fcb
Flavobacterium channae
Pathway
fcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOS89_10460 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcb03019
]
LOS89_10460 (groL)
03110 Chaperones and folding catalysts [BR:
fcb03110
]
LOS89_10460 (groL)
03029 Mitochondrial biogenesis [BR:
fcb03029
]
LOS89_10460 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcb04147
]
LOS89_10460 (groL)
Enzymes [BR:
fcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LOS89_10460 (groL)
Messenger RNA biogenesis [BR:
fcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LOS89_10460 (groL)
Chaperones and folding catalysts [BR:
fcb03110
]
Heat shock proteins
HSP60 / Chaperonin
LOS89_10460 (groL)
Mitochondrial biogenesis [BR:
fcb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LOS89_10460 (groL)
Exosome [BR:
fcb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LOS89_10460 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LOS89_10460 (groL)
Exosomal proteins of breast cancer cells
LOS89_10460 (groL)
Exosomal proteins of colorectal cancer cells
LOS89_10460 (groL)
Exosomal proteins of bladder cancer cells
LOS89_10460 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
NNH2
Motif
Other DBs
NCBI-ProteinID:
UGS23175
LinkDB
All DBs
Position
2253516..2255141
Genome browser
AA seq
541 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGGPTVTKDGVSVAKEIE
LQDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVETIVAELGKQSVAVGDSSEKIKQVASISANNDETIGDLIATAFSKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTDADKMVAELSNPYVLLYDKKISNLQELLPVLEPV
AQSGRPLLIIAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
IAEESGYSLENATLDMLGTAENITIDKDNTTIVNGSGDAENIKARVNQIKSQIETTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKAALANVKAENADEATGIQIVNKAVEAPLRTIVENAGGEGSVVIAKVTDGTADFGFNA
KTGEYVQMLSAGIIDPKKVTRVALENAASVAGMILTTECALIDIKEDTPAMPMGGGMPGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaattcgatattgaagcacgtgatggtttaaaacgtggtgttgac
gcattagcaaatgcagttaaagtaactttaggaccaaaaggaagaaacgtaattatttct
aaatcatttggtgggcctactgtaactaaagatggtgtttctgttgcaaaagaaatcgaa
ttacaagatcctttagaaaatatgggagctcaaatggttaaagaagtagcttctaaaacg
aatgatttagctggagacggaacaactaccgctacagttctagcacaagcaattgttaaa
gagggattgaaaaacgtagctgctggtgcaaacccaatggatttaaaaagaggtatcgat
aaagcagttgaaactatagttgcagaattagggaaacaatctgtagctgttggagattct
tcagaaaaaatcaaacaagttgcttcaatttctgcaaataatgatgaaactattggtgat
ttaatcgctacagcatttagtaaagtaggaaaagaaggagttattactgttgaagaagct
aaaggaactgatacttatgtagatgttgttgaaggaatgcaatttgacagaggttattta
tcgccttacttcgtaacagatgctgacaaaatggttgctgaattgagtaatccttatgtt
ttattgtacgacaaaaaaatttctaatttacaagagttattaccagttttagaaccagtt
gctcaatcaggaagaccattattaattattgctgaagatgttgacggacaagcgttagct
actttagtagtgaacaaactacgtggtggattaaaaatagctgcggttaaagcacctgga
tttggtgatagaagaaaagcaatgttagaagatattgctattttaactggtggaactgtg
attgctgaagaaagcggatattcattagaaaacgctactcttgatatgctaggtactgca
gaaaacattactattgacaaagacaacactacaattgtaaatggttctggagatgctgaa
aacatcaaagcaagagtaaatcaaattaaatcgcaaattgaaactacaacttctgattac
gacagagaaaaattacaagaacgtttggctaaattagctggtggtgttgctgttttatat
gttggtgctgcttctgaagttgaaatgaaagagaaaaaagaccgtgtagatgacgcttta
catgctactcgtgctgcagttgaagaaggaattgttgctggtggtggagttgctttagta
agagcaaaagctgcattagcaaatgtaaaagctgagaacgcagatgaagcaaccggaatt
caaattgtaaataaagcagtagaagcaccattacgtacaattgtagaaaatgcaggtggt
gaaggttctgtagtaattgctaaagtaacagatggaactgctgattttggattcaatgca
aaaacaggagaatatgttcaaatgttatcagctggaattatcgaccctaaaaaagtaact
cgtgtagcattagaaaatgctgcttcagttgcgggtatgattttaactactgaatgtgca
ttaatcgatattaaagaagatactcctgcaatgccaatgggcggaggaatgccaggaatg
atgtaa
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