Flavobacterium channae: LOS89_11010
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Entry
LOS89_11010 CDS
T08502
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
fcb
Flavobacterium channae
Pathway
fcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LOS89_11010 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcb03400
]
LOS89_11010 (mutS)
DNA repair and recombination proteins [BR:
fcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LOS89_11010 (mutS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_14
AAA_29
nSTAND_NTPase5
RecA_C
Motif
Other DBs
NCBI-ProteinID:
UGS24945
LinkDB
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Position
complement(2361153..2363720)
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AA seq
855 aa
AA seq
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MKQYNEIKNKYPDACLLFRVGDFYETFGEDAVRAAGILGITLTKRGAGSDSETALAGFPH
HSLNTYLPKLVKAGLRVAICDQLEDPKMTKTIVKRGVTELVTPGVSMNDEVLQSKSNNFL
ASVHFGKKIVGVSFLDVSTGEFLVSQGNEEYIDKLLQNFRPSEILIPKQFKNQFNSIFGE
DFHTFFLEDWVYKEDYALESLTKHFQTNSLKGFGVEELTDGLIASGAVLYYLSETQHNKI
QHITNIQRIAEDAYVWMDKFTIRNLELYHSYNPNAVTLLDVIDKTLSPMGARLLKRWLAL
PLKDISKIRSRHEVISYLKSNPEILNQIQYQIKQISDLERLISKVATGKISPREVNFLKD
SLDAIIPIKTLALESNNEALRVIGDSLHACELLREKIKATIQEDAPVSVNKGNAIAVGVH
PELDELRNISSTGKGYLEALEQRESAATGIPSLKVSFNNVFGYYIEVRNTHKDKVPAEWI
RKQTLVNAERYITEELKEYESKILGAEEKIHQLETQLFEQLINWIATYIKHVQLNANLIA
QLDCLTSFTQLAIDNKYVCPELDDSFDLEIKDGRHPVIEKQLPVGVPYITNDVYLDRETQ
QIIMITGPNMSGKSAILRQTALIVLMAQMGSFVPAESVRMGVVDKIFTRVGASDNISMGE
STFMVEMNETASILNNISERSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPNKPKTLFA
THYHELNEMEVTFDRIQNFNVSVKELKDTVLFIRKLVKGGSAHSFGIHVAKMAGMPQIVI
QKAQKLLKQLEKRHSSEELAGIKSASDELQLSFFNLDDPLLEEIKEEIVNIDINTLTPVE
ALMKLNEIKRMLVKK
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatataacgaaattaaaaataagtatccagatgcttgtttgctgtttcgcgta
ggggatttttatgagacttttggagaagatgcagttcgtgctgcaggaattttaggaatt
actttaaccaagcgtggagcaggaagtgatagcgaaactgcgttagcgggttttccacac
cattcattaaatacctatttgcctaaattagttaaagcaggacttcgtgttgcaatttgc
gatcaattagaagatccaaaaatgacaaaaacgattgtaaaacgtggtgttacagaatta
gtaactcctggtgtttcgatgaatgatgaggtgttgcagtcgaaatcgaataactttttg
gcttctgttcattttgggaagaaaatagtaggggtttcgtttttagatgtttccaccgga
gagtttttggtatcgcaaggaaacgaagagtatattgataaattattgcaaaatttccgc
ccaagtgagattttaataccaaaacaatttaaaaaccaattcaattctattttcggagag
gattttcatactttctttttagaagattgggtgtataaagaagattatgctttggagagt
ttaaccaagcattttcaaaccaattcgctcaaaggttttggagtggaggaattaacagat
ggattaatcgcttcaggtgctgttttatattatttatccgaaacgcagcataataaaatt
caacatatcaccaatatccaacgtatagctgaagatgcttatgtgtggatggataagttt
accatcaggaatttagagttatatcacagttataaccctaatgcggttacgcttttagat
gtaattgataaaacactttcaccaatgggagcgagattgttaaaaagatggttggcgctt
ccgttgaaagatatttcaaaaattagaagtcgccatgaagtaatttcgtatttgaaatcg
aatcctgaaatattaaatcaaattcaatatcaaatcaaacaaatttcagatttggaacgt
ttgatttcaaaagttgcgacaggtaaaatttcgccaagagaagtaaatttcttgaaagat
tcattagatgctataattccaattaaaactttggcattagaaagtaataatgaagcttta
cgagtaattggtgatagtttgcatgcttgcgaattgttacgcgaaaagattaaagcaact
attcaagaagatgctccagtaagtgtgaataaaggaaatgcaatagctgttggtgttcat
ccggaattagatgaattgcgaaatatttcatctacaggaaaagggtatttggaagcattg
gaacaaagagaaagtgctgcaacaggaattccttccttaaaagtgtctttcaataatgtt
tttgggtattatatagaagttagaaatacacataaagataaagttccggctgaatggatt
cgtaaacaaactttagttaatgctgaacgatatattacagaagaactaaaagaatacgaa
tcgaaaatcttaggtgctgaagaaaaaatccatcaattagaaacccaattgtttgaacaa
ttaattaattggatagcaacttatattaagcacgtacaattgaatgccaatttgatagcg
caattggattgtttaacttcttttacgcaattagcgattgataacaaatatgtttgtcca
gaattggatgatagtttcgatttagaaattaaagatggtcgtcatccagtaattgaaaag
caattacctgttggagtaccttatattacgaatgatgtatatttagatagagaaacccaa
caaatcattatgattacgggtccgaatatgtcgggtaaatcggctattttgcgtcaaacg
gctttaattgtattaatggcgcaaatgggaagttttgttcctgcagaaagcgttagaatg
ggtgttgtggataaaatctttactagagtaggagcaagtgataatatttcgatgggagaa
tctacttttatggtagaaatgaatgaaacagcttctattttgaacaatatttcagaaaga
agtttggttttgctagatgaaattggaagaggaacttcaacttacgatggaatttcgatt
gcttgggcaatttcagaatacttgcatgaacatccaaataagccaaaaacgttgtttgct
acgcattatcacgagttaaacgaaatggaagttacgtttgatagaattcaaaactttaat
gtctcggtaaaggaattaaaagatacggttttattcattcgtaaattggttaaaggagga
agtgcgcatagttttggtattcacgtagcaaaaatggctggaatgcctcaaattgtaatt
caaaaagcacaaaaactattgaaacaactagagaaaagacattcaagtgaagaattggct
ggaataaaatcggctagtgatgaattgcaattgagtttcttcaatttagatgatccgctt
ttagaagaaattaaagaagaaattgtaaatatcgacatcaatacattaacgccagttgaa
gctttaatgaagttgaacgaaataaaacgaatgttggtaaaaaaataa
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