Flavobacterium channae: LOS89_11175
Help
Entry
LOS89_11175 CDS
T08502
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
fcb
Flavobacterium channae
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
LOS89_11175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_AprE
CzcB_C
Beta-barrel_YknX
BSH_CusB
BSH_CzcB
HH_MFP_RND
RND-MFP_C
BSH_LcnD
Beta-barrel_RND_2
YknX_C
HH_EMRA
HH_YBHG
HH_CzcB
BSH_YknX
BSH_YhbJ
PTS_EIIA_1
Biotin_lipoyl
OEP
SpGH101_helical
LcnD_C
SCY_4732_
Spiro_tudor_C
Motif
Other DBs
NCBI-ProteinID:
UGS23309
LinkDB
All DBs
Position
complement(2401650..2402963)
Genome browser
AA seq
437 aa
AA seq
DB search
MSKKTIFILLGSAIGLILLLVGLKKGGVIGNNDDSKIVELSKVAETTIIETVSATGKIQP
EIEVKISSEVSGEIIALPIKEGQQVKKGDLLVRINPDLYESGVNRSVASMSTTKAGLSQA
DAQVKEAKANYDRNQRLFEKGIISKSEWDKVVSSYEVAVANKQSAYYQVQSASATVTEAK
DNLGRTTIYAPADGTISLLNVELGERVLGTQQMAGTEILRIANLNNMEVEVDVNENDIVK
VNIGDSAKIEVDAYLKREFKGIVTSISNSASTALTADQVTNFKVKVRILKESYMDLLEGK
PENYSPFRPGMTATVDIITKRKEKVVAVPISAVVVKDDTTSVKKDVVAELEKKEQEQKGN
APKSDKKYECVFVKVGDKAKLRVVKTGIQDDSNIEIMSGLKPGEEIIIGPYTTVSKELAS
NDKVRVETEKDKKESKK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaaaaccatattcattttattaggaagtgcaatcggattaatcttattgtta
gttggacttaaaaaaggtggtgttattggaaataatgatgattcaaaaattgttgagtta
tcaaaagttgcggaaactacaattatagaaacagtatctgcaacaggaaaaatccaacct
gaaatagaagttaaaatatcttctgaagtttcgggtgaaattattgcgttgcctataaaa
gaaggacaacaagttaaaaaaggagatttattagtaagaatcaatcctgatttatatgaa
tctggtgtaaaccgttctgttgcttctatgtcaacaactaaagcgggtttaagtcaggca
gatgcgcaagtaaaagaagcaaaagcaaattacgatagaaatcaaagattatttgaaaaa
ggaatcatttcaaagtcagaatgggataaagtggtttcatcttatgaagtggctgtagca
aataaacaatcggcttactatcaagtacaaagtgcttcggcaacagttacagaagctaaa
gataatttaggaagaactacaatttatgctccagctgatggaacaatttcattgttaaat
gtagagttaggtgaaagagttttaggaacgcaacaaatggcgggtactgaaattttgaga
attgcgaacttaaacaatatggaagttgaagttgatgtaaacgaaaatgatattgttaaa
gttaatatcggtgattctgcaaaaattgaagttgatgcatatttaaaaagagagtttaaa
ggaattgtaacaagtatttctaactcggctagtacggctttaactgcagatcaagtaact
aatttcaaagttaaagttagaattttgaaagagtcatatatggatttattagaaggtaag
cctgaaaattattcaccatttagacctggaatgacagctacggttgatattattacaaaa
cgtaaagaaaaagttgttgcggtgccaataagtgcagttgttgtaaaagacgatacaact
tcggttaaaaaagatgttgttgctgaattagaaaagaaagaacaagaacaaaaaggaaat
gctcctaaaagtgataaaaaatacgaatgtgtttttgtaaaagtaggagataaggctaag
ttaagagttgtaaaaacaggaattcaagatgatagcaatatagaaatcatgtctggatta
aaaccaggtgaagaaattattatcggaccatatacaacggtttcaaaagaattagcatct
aacgataaagttagagtagaaactgaaaaagataaaaaagaaagtaagaaatag
DBGET
integrated database retrieval system
