Flavobacterium channae: LOS89_11885
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Entry
LOS89_11885 CDS
T08502
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fcb
Flavobacterium channae
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcb03016
]
LOS89_11885 (truB)
Enzymes [BR:
fcb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LOS89_11885 (truB)
Transfer RNA biogenesis [BR:
fcb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LOS89_11885 (truB)
Prokaryotic type
LOS89_11885 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UGS23444
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All DBs
Position
2552774..2553472
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AA seq
232 aa
AA seq
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MTSEEILAGKVLLIDKPLTWSSFQAVNKLKYILKRKYDLPKKFKIGHAGTLDPLATGLLI
ICTGKFTKQITEIQAQAKEYTGTIIIGATTPSYDLETEIDATFPTEHITEELILETTKQF
LGEIDQKPPVFSAIKKDGKRLYEHARAGEEVEIQARKTTIYEFEITRIQFPEVDFRVKCS
KGTYIRSLAYDFGLALQSGGHLTALRRTKIGDYSVNNAISPEDFEKEINNEN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagaagaaattttagccggaaaagtattgctaatcgacaagcctttaacgtgg
tcttcgtttcaggcggttaataaattgaaatacattttaaaacgcaaatacgatttacct
aaaaaatttaaaattggtcatgccggaacgctagatcctttagcaactggtttattaatt
atttgtactggaaagtttaccaaacaaattaccgaaattcaagcacaagcaaaagaatat
actggaacaattataattggagccactactccatcttatgatttagaaacagaaatagat
gcaacttttccaacagaacatattactgaagaattgattttagaaactactaaacaattt
ttaggcgaaatagatcaaaaaccacctgttttttcagctataaaaaaagatggaaaacgt
ttgtacgaacacgctcgtgctggcgaagaagtagaaattcaagcaagaaaaactacgatt
tacgaatttgaaattacaagaatacaatttcctgaagtagatttcagagtaaaatgcagc
aaaggaacatacattcgttcgttagcttatgattttggattagctctacaatctggaggt
catttaaccgcattaagaagaacgaaaattggtgattattcagttaacaatgctatttca
cctgaagattttgaaaaagaaataaataatgaaaactaa
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