Flavobacterium channae: LOS89_13055
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Entry
LOS89_13055 CDS
T08502
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
fcb
Flavobacterium channae
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LOS89_13055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
YqgF
T2SSK
HHH
HHH_6
Spt6_S1
HHH_5
OB_PDCD11
ATP-synt_ab_C
S1_RRP5
DUF2278
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UGS23668
LinkDB
All DBs
Position
complement(2803793..2805919)
Genome browser
AA seq
708 aa
AA seq
DB search
MTNIQFIQNQTNIAPKSIEATIKLLSEDCTIPFISRYRKDQTGNLDEVQIEAISKLNKQF
DEIIKRKESILKSIEEQNALSPELKSKIENSFDLQELEDFYLPYKKKKKTKADVARENGL
EPLAKIIISQKNDDIEFLASKYLNANFKNEDEVLQGARDIIAEWINENIFIRKNLRRMFQ
RKAEITTKVVKTKKDDEAAQKFSQYFDWSEPISKAPSHRLLAMLRAEAEGFVKLNVAIEK
EEALDFIEENIIKNKNSDATEHLELAIKDSYKRLLEPAISNETLQEAKAKADIKAIDVFS
ENLRQLLLAPPLGEKRILAIDPGYRTGCKVVCLDEKGDLLNNETIYPHAPQNDTAMAMKK
IRSMVNAYNIEAISIGNGTASRETEFFIKKIAFDKPVQVFVVSEAGASVYSASKIAREEF
PNYDVTVRGSVSIGRRLSDPLAELVKIDPKSIGVGQYQHDVDQAKLQSALDSTVMSCVNA
VGININTASKSLLSYVSGIGEKMAENIVAYRSENGPFEDRKQLKKVPRLGEKAYQQAAAF
IRIRDGKNPLDNSAVHPEAYPIVEKMAKDLGIKTNELIANKEKIAQIKPENYITTEIGIL
TLKDILKELEKPGLDPRKAAKIFEFDPNVRSISDLKTGMILPGIVNNITAFGCFVDLGIK
ESGLVHISQLKEGYVSDVNEVVKMHQHVQVKVVEVDEARKRIQLTMIL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacattcaattcattcaaaaccaaaccaacattgctccaaaaagcattgaagct
accataaaattactttcagaagattgtacgattccgtttatttcgcgttacagaaaagat
caaaccggaaatttagatgaggtgcaaatcgaagcaatttcgaaattaaacaagcaattt
gatgaaatcatcaagcgaaaagaaagtattttaaaatcgattgaagagcaaaatgcactt
tcgcctgaattgaaatccaaaattgaaaacagttttgatttacaagaattggaagatttc
tatttgccttacaaaaagaagaaaaaaaccaaagccgatgtcgctcgtgaaaacggatta
gaacctttggcaaaaattatcataagtcaaaaaaatgatgatattgagtttttagcctca
aaatatttgaatgccaattttaaaaacgaagacgaagtcttacaaggcgctcgcgatatc
attgccgaatggattaacgaaaacatctttattcgtaaaaatttacgtagaatgttccaa
cgaaaagctgaaatcaccacgaaggttgtaaaaactaaaaaagacgacgaagcagctcaa
aaattctcccaatatttcgattggtcagaacctatttccaaagcaccatcgcatcgttta
ttagctatgttacgtgctgaagcggaaggttttgttaaattaaatgttgccatcgaaaaa
gaagaagcgctagattttatcgaagaaaatatcattaaaaataaaaattcggatgcaacc
gaacatttagaattagcgataaaagacagttacaaacgtttgttggaaccagctatttca
aacgaaactttacaagaagcaaaagcaaaagccgacataaaagcgattgatgtgttttcc
gaaaatttacgtcagttattgttagctccaccattaggagaaaaacgaattttagccatt
gacccaggatatagaaccggttgtaaagtcgtgtgtttggatgaaaaaggtgatttgtta
aacaacgaaactatttatccacatgcaccacaaaacgataccgctatggcgatgaaaaaa
atccgttcgatggtgaatgcctacaatattgaagcgatttctatcggaaacggaacagct
tctcgtgaaactgaatttttcattaaaaaaatcgcttttgataaacctgttcaagtattt
gtagtttcggaagcgggagcatcggtatattctgcgagtaaaattgcgagagaagaattt
ccaaattacgacgtaacggttcgtggttcggtttctattggtagacgactttcagatcca
ttagcagaattggtaaaaattgatccgaaatctattggtgttggacaataccagcacgat
gtggatcaagctaaattgcaatcagcattagatagcacagtaatgagttgtgtgaatgct
gttgggattaacatcaatacggctagtaaatcgttgttaagttatgtatcaggaattggt
gaaaaaatggcggaaaatattgtagcatatcgttcagaaaacggaccatttgaagataga
aagcaattgaaaaaagtaccacgtttaggagaaaaagcgtaccaacaagccgcagctttt
attagaattcgcgatgggaaaaacccgttggataattcggctgtgcatccagaagcgtat
cctattgtggaaaaaatggcaaaagatttaggcatcaaaaccaatgaattaatcgctaat
aaagaaaaaatcgctcaaataaaacctgaaaattatatcacaactgaaatagggatttta
actttaaaagatattctaaaagagttagaaaaaccaggtttagatccaagaaaagcagca
aaaattttcgaattcgacccgaatgttcgctctatttctgatttaaaaaccggcatgatt
ttacctggaattgttaataacattactgcttttggttgttttgtagatttaggaatcaaa
gaaagcggtttggtgcacatttcccaattaaaagaaggctatgtttctgatgtaaacgaa
gtagtaaaaatgcatcaacacgtgcaagtaaaagtcgttgaggtggacgaagcgagaaaa
cgcattcagttgacgatgattttgtaa
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