Flavobacterium cyclinae: LOS86_00150
Help
Entry
LOS86_00150 CDS
T08416
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
fcc
Flavobacterium cyclinae
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fcc01011
]
LOS86_00150
Enzymes [BR:
fcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LOS86_00150
Peptidoglycan biosynthesis and degradation proteins [BR:
fcc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LOS86_00150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM2_CERK1_LYK3_4_5
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
UGS21069
LinkDB
All DBs
Position
complement(25338..26843)
Genome browser
AA seq
501 aa
AA seq
DB search
MKKTIIISSFLLTFFSYAQESAEKENLLPLPKMSYLDSLKTTFVNHTTSNCIDERWLSEL
ANFELSNDMYNDIETFDIDAEVSYNLSTEILKKRLAKMDAKSPFNIEYHPALENTIKAFL
KNRPKAFERLMAISEYYFPMFEENLAKYNIPLELKYLAIVESALNPKAKSRVGASGLWQF
MYPTGKQYNLEVTSYVDERYDPLKATEAACQYLSSLYGIFGDWSMVLAAYNCGPGNVSKA
IRRSGGSQNYWNIRKNLPRETANYVPAFLATFYIYEFKKEHGIIPNKAPLTYFETDTIMI
KKQMSFKHISELLDISEEQLEFLNPIYKLKVIPFETDKPHYLRLPKEKMGLFVSNEEKVY
AYLTYLDTQKEKQVYVATTSENESFHEGSQKKLHYHTIKSGESLGKIAQRYNVSISHLRS
WNNIKGNTIHAGKKLKIYSDKKALAKVETKTNNDGTYTVKSGDSLFSISRQFPGVSIEDI
KKWNDISGDNIQPGMKLKING
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccattataatatcctcttttttattgaccttttttagctatgcgcaagaa
tcggcagaaaaagaaaatttacttccgttgcctaaaatgtcctatttggattctttgaaa
acaacgtttgtaaatcatactacaagtaattgtatagatgaaagatggctttcagaattg
gctaattttgaattgtcaaatgatatgtataacgacattgaaacatttgatattgatgcc
gaagtaagctataacctttctactgaaattttaaagaaacgtttagcaaaaatggatgct
aaatcgccatttaatattgaatatcatccagcattagaaaacacgattaaagccttttta
aaaaatcgtcctaaagcatttgagcgtttaatggcaatttcggaatattattttcctatg
tttgaagagaatttagcaaaatataacattcctttagaattaaagtatttagctattgtt
gaatctgctttaaatccaaaagcaaaatctcgtgttggagcttctggtttgtggcaattt
atgtatccaacaggaaaacaatataacttagaagttacatcgtatgttgatgaacgatac
gatcctttaaaagccacagaagctgcatgtcaatatttatcaagtttatatggaattttt
ggagattggagtatggtattagcagcgtacaattgtggaccaggtaatgtttctaaagca
attcgtcgttcgggtggaagccaaaattattggaacattcgtaaaaatttacctagagaa
acagcaaattatgtacctgcatttttagctacattttacatttacgagttcaaaaaagaa
catggaataattcctaataaagcaccattaacgtattttgaaacggatacgattatgata
aaaaaacaaatgtctttcaaacatatttcggaattgttggatatttctgaagagcaatta
gagtttttaaatccgatttataaattaaaagtaattccttttgaaacggataagcctcac
tatttgcgtttacctaaagaaaaaatgggattatttgtttcaaatgaagaaaaagtgtac
gcctatcttacttaccttgatactcaaaaagaaaagcaagtttatgtggcaaccacctct
gaaaatgaatcatttcatgaaggatcgcaaaagaaacttcattatcacaccataaaaagt
ggggaaagtttgggtaaaattgcacaacgctataatgtttccatttcacatttaagatct
tggaataacattaaaggaaatacaattcatgctggaaaaaaattaaaaatttattccgac
aaaaaagctctagctaaagtggagactaaaaccaacaatgacggaacttacacggttaaa
agtggcgattctttattttcaatttcaagacaatttccaggggtatcgatagaagatatt
aaaaaatggaacgatattagtggtgataacatacaaccaggaatgaaattaaaaattaac
ggataa
DBGET
integrated database retrieval system
