KEGG   Flavobacterium cyclinae: LOS86_00280
Entry
LOS86_00280       CDS       T08416                                 
Name
(GenBank) RNA-binding transcriptional accessory protein
  KO
K06959  protein Tex
Organism
fcc  Flavobacterium cyclinae
Brite
KEGG Orthology (KO) [BR:fcc00001]
 09190 Not Included in Pathway or Brite
  09192 Unclassified: genetic information processing
   99973 Transcription
    LOS86_00280
SSDB
Motif
Pfam: Tex_YqgF Tex_central_region HHH_3 Tex_N HHH_9 S1 HHH_7 YqgF T2SSK HHH HHH_6 Spt6_S1 HHH_5 ATP-synt_ab_C S1_RRP5 HHH_2
Other DBs
NCBI-ProteinID: UGS21094
LinkDB
Position
55493..57631
AA seq 712 aa
MTHIQFIQNQINIAPKSIEATIKLLSEDCTIPFISRYRKDQTGNLDEVQIEAISKLNKQF
DEIIKRKESIIKSIEEQNALSPELKAKIENSFDLQELEDFYLPYKKKKKTKADVARENGL
EPLAKIIMSQSRSVGTDDIEFLASKYLNANVKNEDEALQGARDIIAEWINENIFIRKNLR
RLFQRKAEITTKVVKTKKDDEAAQKFSQYFDWSEPISKAPSHRLLAMLRAEAEGFVKLNV
AIEKEEALNFIEENIIKNKNSDATEHLELAIKDSYKRLLEPAISNETLQEAKAKADIKAI
DVFSENLRQLLLAPPLGEKRILAIDPGYRTGCKVVCLDEKGDLLNNETIYPHAPQNDTAM
AMKKIRSMVNAYNIEAISIGNGTASRETEFFIKKIAFDKPVQVFVVSEAGASVYSASKIA
REEFPNYDVTVRGSVSIGRRLSDPLAELVKIDPKSIGVGQYQHDVDQTKLQSALDSTVMS
CVNSVGININTASKSLLSYVSGIGEKMAENIVAYRSENGPFEDRKQLKKVPRLGEKAYQQ
AAAFIRIRDGKNPLDNSAVHPEAYPIVEKMAKDLGIKTNELIANKEKIAQIKPENYITTE
IGILTLKDILKELEKPGLDPRKAAKIFEFDPNVRSISDLKTGMILPGIVNNITAFGCFVD
LGIKESGLVHISQLKEGYVSDVNEVVKMHQHVQVKVVEVDEARKRIQLTMIL
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgacccacattcaattcattcaaaaccaaatcaacattgctccaaaaagcattgaagct
actataaaattactttctgaagattgtacgattccgtttatttcgcgttaccgaaaagat
caaactggaaatttagatgaggttcaaatcgaagctatttcgaaattaaacaagcaattt
gatgaaatcattaagcgaaaagaaagcattataaaatcgattgaagagcaaaatgcactt
tcgccagaattgaaagctaaaattgaaaatagttttgatttacaagaattggaagatttc
tatttaccttataaaaagaagaaaaaaaccaaagctgatgtcgctcgtgaaaatggatta
gaaccgttggcaaaaatcattatgagtcaatcccgaagtgtcgggactgatgatattgag
tttttagcatcgaaatatttgaatgcaaacgttaaaaatgaagacgaagccttacaaggc
gctcgcgatatcattgcggaatggattaacgaaaacatatttattcgtaaaaatttacgt
cgcttattccaacgaaaagctgaaatcacaactaaagtcgttaaaactaaaaaagatgac
gaagcggctcaaaaattctcccaatatttcgattggtcagaaccgatttccaaagcacca
tcgcatcgtttattagctatgttgcgagctgaagcggaaggttttgtgaaattaaatgtc
gcaatcgaaaaagaagaagccttaaattttatcgaagaaaatattatcaaaaataaaaat
tcggatgcaaccgaacatttagaattagcgataaaagacagctacaaacgtttgttggaa
ccagcaatttcaaacgaaaccttgcaagaagcaaaagcaaaagccgacataaaagcgatt
gatgtgttttccgaaaatttacgtcagttactattagcaccaccattaggcgaaaaacga
attttagctatcgaccctggttatagaactggttgtaaagtagtgtgtttagatgaaaaa
ggagatttattaaataacgaaaccatttatccacatgcaccacaaaacgataccgctatg
gcgatgaaaaaaattcgttccatggtgaatgcgtacaatattgaagccatttctattgga
aatggaacagcttctcgtgaaacggagttttttatcaaaaaaattgcttttgataaaccg
gttcaagtttttgtggtttcggaagcgggagcatcggtatattctgcgagtaaaattgcg
agagaagaatttccaaattacgatgtaaccgttcgtggttctgtttcgattggaagaaga
ctttctgacccattggcagaattggtaaaaattgatccaaaatctatcggtgttggacaa
tatcagcacgatgtagatcaaactaagttacaatcagcattagatagcacggtgatgagt
tgcgtgaattctgttgggattaacatcaatactgctagtaaatcattattgagttatgtt
tcaggaattggtgaaaaaatggcggaaaatattgtggcttatcgttcagagaacgggcct
tttgaagatagaaagcaactgaaaaaagtgccacgtttgggagaaaaagcttatcaacaa
gccgcagctttcattagaattcgcgatgggaaaaatccattggataattcagctgttcac
cctgaagcgtatcctattgtggaaaaaatggcaaaagatttaggcatcaaaaccaatgaa
ttaatcgctaataaagaaaaaatcgctcaaataaaacctgaaaattatatcacaactgaa
atagggattttaactttaaaagatattctaaaagagttagaaaaaccaggtttagatcca
agaaaagcagcaaaaattttcgaattcgatccaaatgttcgctctatttctgatttaaaa
accggcatgattttaccaggaattgtgaataatattacggcttttggatgttttgtagat
ttaggtatcaaagaaagtggtttggtgcacatttcgcaattgaaagaaggctatgtttcg
gatgtaaacgaagtggtaaaaatgcaccaacacgtgcaagtaaaagtcgttgaggtggac
gaagcaagaaaacgcattcagttgacgatgattttgtaa

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