Flavobacterium cyclinae: LOS86_00280
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Entry
LOS86_00280 CDS
T08416
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
fcc
Flavobacterium cyclinae
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LOS86_00280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
YqgF
T2SSK
HHH
HHH_6
Spt6_S1
HHH_5
ATP-synt_ab_C
S1_RRP5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UGS21094
LinkDB
All DBs
Position
55493..57631
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AA seq
712 aa
AA seq
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MTHIQFIQNQINIAPKSIEATIKLLSEDCTIPFISRYRKDQTGNLDEVQIEAISKLNKQF
DEIIKRKESIIKSIEEQNALSPELKAKIENSFDLQELEDFYLPYKKKKKTKADVARENGL
EPLAKIIMSQSRSVGTDDIEFLASKYLNANVKNEDEALQGARDIIAEWINENIFIRKNLR
RLFQRKAEITTKVVKTKKDDEAAQKFSQYFDWSEPISKAPSHRLLAMLRAEAEGFVKLNV
AIEKEEALNFIEENIIKNKNSDATEHLELAIKDSYKRLLEPAISNETLQEAKAKADIKAI
DVFSENLRQLLLAPPLGEKRILAIDPGYRTGCKVVCLDEKGDLLNNETIYPHAPQNDTAM
AMKKIRSMVNAYNIEAISIGNGTASRETEFFIKKIAFDKPVQVFVVSEAGASVYSASKIA
REEFPNYDVTVRGSVSIGRRLSDPLAELVKIDPKSIGVGQYQHDVDQTKLQSALDSTVMS
CVNSVGININTASKSLLSYVSGIGEKMAENIVAYRSENGPFEDRKQLKKVPRLGEKAYQQ
AAAFIRIRDGKNPLDNSAVHPEAYPIVEKMAKDLGIKTNELIANKEKIAQIKPENYITTE
IGILTLKDILKELEKPGLDPRKAAKIFEFDPNVRSISDLKTGMILPGIVNNITAFGCFVD
LGIKESGLVHISQLKEGYVSDVNEVVKMHQHVQVKVVEVDEARKRIQLTMIL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacccacattcaattcattcaaaaccaaatcaacattgctccaaaaagcattgaagct
actataaaattactttctgaagattgtacgattccgtttatttcgcgttaccgaaaagat
caaactggaaatttagatgaggttcaaatcgaagctatttcgaaattaaacaagcaattt
gatgaaatcattaagcgaaaagaaagcattataaaatcgattgaagagcaaaatgcactt
tcgccagaattgaaagctaaaattgaaaatagttttgatttacaagaattggaagatttc
tatttaccttataaaaagaagaaaaaaaccaaagctgatgtcgctcgtgaaaatggatta
gaaccgttggcaaaaatcattatgagtcaatcccgaagtgtcgggactgatgatattgag
tttttagcatcgaaatatttgaatgcaaacgttaaaaatgaagacgaagccttacaaggc
gctcgcgatatcattgcggaatggattaacgaaaacatatttattcgtaaaaatttacgt
cgcttattccaacgaaaagctgaaatcacaactaaagtcgttaaaactaaaaaagatgac
gaagcggctcaaaaattctcccaatatttcgattggtcagaaccgatttccaaagcacca
tcgcatcgtttattagctatgttgcgagctgaagcggaaggttttgtgaaattaaatgtc
gcaatcgaaaaagaagaagccttaaattttatcgaagaaaatattatcaaaaataaaaat
tcggatgcaaccgaacatttagaattagcgataaaagacagctacaaacgtttgttggaa
ccagcaatttcaaacgaaaccttgcaagaagcaaaagcaaaagccgacataaaagcgatt
gatgtgttttccgaaaatttacgtcagttactattagcaccaccattaggcgaaaaacga
attttagctatcgaccctggttatagaactggttgtaaagtagtgtgtttagatgaaaaa
ggagatttattaaataacgaaaccatttatccacatgcaccacaaaacgataccgctatg
gcgatgaaaaaaattcgttccatggtgaatgcgtacaatattgaagccatttctattgga
aatggaacagcttctcgtgaaacggagttttttatcaaaaaaattgcttttgataaaccg
gttcaagtttttgtggtttcggaagcgggagcatcggtatattctgcgagtaaaattgcg
agagaagaatttccaaattacgatgtaaccgttcgtggttctgtttcgattggaagaaga
ctttctgacccattggcagaattggtaaaaattgatccaaaatctatcggtgttggacaa
tatcagcacgatgtagatcaaactaagttacaatcagcattagatagcacggtgatgagt
tgcgtgaattctgttgggattaacatcaatactgctagtaaatcattattgagttatgtt
tcaggaattggtgaaaaaatggcggaaaatattgtggcttatcgttcagagaacgggcct
tttgaagatagaaagcaactgaaaaaagtgccacgtttgggagaaaaagcttatcaacaa
gccgcagctttcattagaattcgcgatgggaaaaatccattggataattcagctgttcac
cctgaagcgtatcctattgtggaaaaaatggcaaaagatttaggcatcaaaaccaatgaa
ttaatcgctaataaagaaaaaatcgctcaaataaaacctgaaaattatatcacaactgaa
atagggattttaactttaaaagatattctaaaagagttagaaaaaccaggtttagatcca
agaaaagcagcaaaaattttcgaattcgatccaaatgttcgctctatttctgatttaaaa
accggcatgattttaccaggaattgtgaataatattacggcttttggatgttttgtagat
ttaggtatcaaagaaagtggtttggtgcacatttcgcaattgaaagaaggctatgtttcg
gatgtaaacgaagtggtaaaaatgcaccaacacgtgcaagtaaaagtcgttgaggtggac
gaagcaagaaaacgcattcagttgacgatgattttgtaa
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