Flavobacterium cyclinae: LOS86_01220
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Entry
LOS86_01220 CDS
T08416
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fcc
Flavobacterium cyclinae
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcc03400
]
LOS86_01220 (radA)
DNA repair and recombination proteins [BR:
fcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LOS86_01220 (radA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
AAA
DUF7125
AAA_22
Lon_C
AAA_5
AAA_24
AAA_14
AAA_16
nSTAND_NTPase5
CobU
NTPase_1
RsgA_GTPase
ABC_tran
Rad51
UCP018868
NACHT
DZR
DUF8310
nSTAND3
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UGS21276
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Position
complement(252023..253384)
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AA seq
453 aa
AA seq
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MSKVKTAFFCQNCGTQYSKWQGQCNACKEWNTIVEELVQKEEKVAWKTTTATSKAVTKPL
LVKEIDTAQEIRLNTTDNELNRVLGGGLVPGSLTLLGGEPGIGKSTLLLQIALKLPYKTL
YVSGEESQKQIKMRAERITSNGDNCYILTETKTQNIFRQILEIEPDIVIIDSIQTLHTDY
IESSAGSISQIRECTAELIKFAKETNTPVLLIGHITKDGTIAGPKILEHMVDTVLQFEGD
RNHVYRILRSLKNRFGSTAELGIYEMQGSGLREVDNPSEILISHKDEQLSGTAIATTLEG
MRPLMIEIQALVSTAVYGTPQRSTTGYNAKRLNMILAVLEKRAGFRLGTKDVFLNVTGGI
SVEDTAIDLAVVAAILSSNEDIAIAEGFCFAGEVGLSGEIRPVNRIEQRIQEAEKLGFTT
IFVSKHNKISLKNTGIKIVLVAKIEDVVSELFG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtaaaaacggcttttttttgccaaaactgtggcacccaatattcgaaatgg
caaggacaatgtaatgcctgtaaagaatggaatactatagttgaagaattggttcaaaag
gaagaaaaagtcgcttggaaaactacaaccgcaacttctaaagccgttacaaaaccttta
ctcgtaaaagaaatagacactgcacaagaaatccgattaaacacgacagacaacgagttg
aatcgggttttgggtggtggattagtaccaggttccttaacgttattaggcggcgaacca
ggaataggaaaaagtacgttactcttgcaaattgctttaaaattaccttataaaaccctt
tatgtttcgggagaagaaagccaaaaacagattaaaatgcgtgccgaacgtattacttcg
aatggcgataattgctacattttaaccgaaaccaaaacccaaaatatcttccgtcaaatt
ttggaaattgaacccgatattgtcattatcgattcgattcaaactttacataccgattac
attgaatcgtcagccggaagtatttcacagattagagaatgtacagccgagttgataaaa
tttgccaaagaaaccaatacacccgtacttttaatcgggcacattaccaaagacggcacc
atagccggacccaagattttggaacacatggtcgataccgttttgcaatttgaaggcgac
agaaatcacgtgtatcgaattttacgttcgttaaaaaaccgttttgggtctactgctgag
ttagggatttacgaaatgcaaggttctggcttacgcgaagtagataatccatctgaaatt
ttgatttcgcataaagacgaacaactttcaggaactgctattgctactactttagaaggc
atgcgtccgttgatgattgaaattcaagccttagtaagtactgcagtttatggaacgcca
caacgcagcaccacaggttacaacgcaaaacgcttaaacatgattttagcggttttagaa
aaacgtgctggatttcgattgggaaccaaagacgttttccttaacgttacaggcggaatt
tctgtagaagacactgcaattgatttagcagttgtggctgctattttatcctcaaacgaa
gacattgctattgctgaaggtttttgctttgcaggagaagtaggactttcaggcgaaatc
agacccgttaaccgtattgaacaacgcattcaagaagccgaaaaattaggatttaccacg
atttttgtttccaaacacaacaaaatttcattgaaaaacacaggaatcaaaattgtttta
gtggctaaaattgaagatgtggtgagtgagttgtttggataa
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