Flavobacterium cyclinae: LOS86_01915
Help
Entry
LOS86_01915 CDS
T08416
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fcc
Flavobacterium cyclinae
Pathway
fcc03030
DNA replication
fcc03410
Base excision repair
fcc03420
Nucleotide excision repair
fcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOS86_01915 (polA)
03410 Base excision repair
LOS86_01915 (polA)
03420 Nucleotide excision repair
LOS86_01915 (polA)
03440 Homologous recombination
LOS86_01915 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcc03032
]
LOS86_01915 (polA)
03400 DNA repair and recombination proteins [BR:
fcc03400
]
LOS86_01915 (polA)
Enzymes [BR:
fcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOS86_01915 (polA)
DNA replication proteins [BR:
fcc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LOS86_01915 (polA)
DNA repair and recombination proteins [BR:
fcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LOS86_01915 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOS86_01915 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
RNase_H_2
Imm51
CcdB
HHH
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
UGS22360
LinkDB
All DBs
Position
complement(392363..395215)
Genome browser
AA seq
950 aa
AA seq
DB search
MSQKRLFLLDAYALIFRGYYAFIKNPRINSKGMDTSAIMGFMNSLMDVIKREKPDHLAVA
FDKGGSDYRFEMYQEYKAHRDETPEAIKIAVPYIQELLRAMHIPIIEKAGFEADDLIGTL
AKQAEKEGFQVFMVTPDKDFAQLVSENIFMYKPARMGNDIEIWGIPEVLEKFEIERPDQV
IDFLGMMGDSADNIPGLPGVGEKTAKKFLAEYGTLENLLANTHQLKGAMKEKIEANKELG
ILSKKLATILLDCPVTFDADDFELSKPDVEKTDALFQELEFRQMKAQFDKLFGSGKEYDE
IDTNGTTSDTPQPTKKSPAKKSNEDQFDLFGFSDESDEPTANHSYYATLENTTHFYQIVQ
GDLPVKLLLQNLLNQTSVCFDTETTGIDALNAELVGMSFSFEKGKGFYVPFPENQEEAQT
LIEKFRPFFENETIEKIGQNMKYDLKILSNYNIQVKGKLFDTMIAHYLINPDMRHNMDVL
SETYLKYAPKSIETLIGKKGKNQLSMRDVPLEDIKEYATEDADITFQLKEHFQPILEKVG
TKKLFDEIEIPLVPVLADMEKEGIRLDVEFLKSMSVDMQKEIDAFEQQIYETAGEKFNLA
SPKQLGDILFDKLKIGGAKQKKTKTGQYATGEEVLSYLANEHQIVRDILEWRQMVKLQST
YIDALPNQVDKKTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQIRKAFIARDEN
YTLLSADYSQIELRIIAALCGEENMIKAFQNHEDIHKSTAAKVFNVPLDEVTKEQRSHAK
TVNFGIIYGVSAFGLSNQTNLSRKESAELIEAYYKTYPRLKSFIQEQVDFARENGYVETI
SGRRRYLKDINSANAIVRGGAERNAVNAPIQGSAADIIKIAMINIHKKLTSENWKSKMLL
QVHDELVFDVHNSELEKIQPMIKHEMENAFKMAVPLDVEIGLGKNWLEAH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaaacgattattcttattagacgcctacgcacttatctttcgcggctattac
gcttttataaaaaatcctcgaatcaactctaaaggaatggatacttctgccattatggga
ttcatgaattctttgatggatgttattaagcgtgaaaaaccagatcatttagcagtagca
ttcgataaaggcggaagtgattaccgtttcgaaatgtatcaagaatacaaagcgcatcgt
gacgaaactcctgaagcgataaaaattgcagttccctatattcaggaattgttacgcgct
atgcacattcccattatagaaaaagcaggttttgaagccgatgatttaattggaacttta
gccaaacaagccgaaaaagaaggtttccaagttttcatggtaacgccagataaggatttt
gcccaattggtttcggaaaatattttcatgtacaaaccagcccgaatggggaatgatatc
gaaatctggggaattcctgaagtcttagaaaaatttgaaatcgagcgtcctgaccaagta
attgatttcttaggaatgatgggcgattctgccgataatattcctggattgcctggtgtg
ggagaaaaaacagctaagaaattcttagcggaatatggaactttagagaatttattagcc
aacacgcatcaactaaaaggtgcgatgaaagaaaaaattgaagccaataaagagttggga
attttatctaaaaagttagccactatcctactcgattgtccggtgacttttgatgcggat
gattttgaattatcaaaacctgatgtggagaaaaccgatgctttgtttcaggaattagaa
ttccgccaaatgaaagcgcagtttgataaattatttggttcaggtaaagaatatgatgaa
attgacactaacggaacaacttcagatacgccacaacccactaaaaaatctcctgcaaaa
aaatcaaacgaagatcaattcgacttatttggttttagcgatgaatcggatgaaccaact
gcgaatcattcgtattatgctacattagaaaatacaacgcatttctatcaaattgttcaa
ggcgatttacctgtaaagctgttattacagaatttactaaatcaaacttcggtttgtttt
gatacggaaactactggaattgatgctttgaatgctgaattagtaggaatgtcgttctct
ttcgaaaaaggaaaaggattttatgttccgtttcccgaaaatcaggaagaagcacaaact
ttaattgaaaaattccgaccattcttcgaaaatgaaactatcgaaaaaatcggtcagaac
atgaaatacgacttgaaaattctttcgaattataacattcaagtcaaaggtaaattattc
gataccatgattgcgcattatctgattaatcctgatatgcgtcataatatggatgttttg
agtgaaacgtatttgaaatatgccccaaaatcgattgaaactttaattggtaaaaaagga
aaaaatcaattgtcaatgcgcgatgttcctttggaagacatcaaagaatatgctactgaa
gatgctgatattaccttccaattgaaggaacacttccaaccgattttagaaaaagtaggt
acgaaaaaattgtttgacgaaatcgaaattccattagttcctgttttagccgatatggaa
aaagaaggaattcgtttggatgtggaatttctaaaaagtatgtcggttgatatgcaaaaa
gaaatcgatgcttttgaacaacaaatctatgaaaccgctggtgagaaattcaatttggct
tctccaaaacagttaggcgatattttatttgacaaactaaaaattggtggcgcaaaacaa
aagaaaaccaaaaccggtcaatatgccactggtgaagaagtgttgagttatttggcaaac
gaacatcaaattgtacgcgatattttagaatggcgtcaaatggtgaaattgcaaagtacg
tatattgatgctttaccaaatcaagtcgataaaaaaacaggaagagtgcataccgattat
atgcaaacggttgcggctacaggtcgattgagttcgaataatccgaatttacaaaacatt
ccaattcgtaccgaaagaggaagacaaattagaaaagccttcattgcgcgtgatgaaaat
tacacgctactttctgccgattattctcaaattgaattgcgtattattgccgctttgtgt
ggggaagaaaacatgattaaagcgtttcaaaatcacgaagatattcacaaaagtacggct
gcaaaagtgttcaatgtgcccttagatgaagtgacaaaagagcaaagaagtcacgccaaa
accgtaaacttcggaattatctatggcgtttcggcttttggattgagcaaccaaaccaac
ttatcacgaaaagaaagcgcagaattaattgaagcgtattacaaaacatatccaagatta
aaatcgttcattcaagagcaagtagattttgctagagaaaacggttatgtagaaaccatt
tcaggaagaagacgttatttaaaagacatcaactcagccaacgcaattgttcgtggtggt
gcggaacgaaatgcggtgaatgcgccaatacaaggttcggctgcggatatcattaaaatt
gcgatgattaacatccacaaaaaattgacttctgaaaattggaaatcaaaaatgctattg
caagttcatgacgaattagtatttgacgtacacaactccgaattagaaaaaattcaaccg
atgattaaacacgaaatggaaaacgcgttcaaaatggcagttccgttagatgtagaaatt
ggattaggcaaaaattggttggaagcgcattag
DBGET
integrated database retrieval system
