Flavobacterium cyclinae: LOS86_02280
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Entry
LOS86_02280 CDS
T08416
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
fcc
Flavobacterium cyclinae
Pathway
fcc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LOS86_02280 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcc03400
]
LOS86_02280 (mutS)
DNA repair and recombination proteins [BR:
fcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LOS86_02280 (mutS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_14
AAA_29
RecA_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UGS22362
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Position
482865..485432
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AA seq
855 aa
AA seq
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MKQYNEIKNKYPDACLLFRVGDFYETFGEDAVRAAGILGITLTKRGAGSDSETALAGFPH
HSLNTYLPKLVKAGLRVAICDQLEDPKMTKTIVKRGVTELVTPGVSMNDEVLHSKSNNFL
ASVHFGKKTVGVSFLDVSTGEFLVAQGNEEYIDKLLQNFRPSEILIPKQFKNQFHSVFGD
DFHTFFLEDWVYKEDYALESLTKHFQTNSMKGFGVEELTEGLIASGAILYYLSETQHNKI
QHITNIQRIAEDAYVWMDKFTIRNLELYHSYNPNAVTLLDVIDKTLSPMGARLLKRWLAL
PLKDISKIRSRHEVISYLKSNPEVLQQIQYQIKQISDLERLISKVATGKISPREVNFLKD
SLDAIIPIKTLALASSNEALRVIGDSLHACELLREKIKTTIQEDAPVSVNKGNAIAVGVH
PELDELRNISSTGKGYLEALEQRESAATGIPSLKVSFNNVFGYYIEVRNTHKDKVPAEWI
RKQTLVNAERYITEELKEYESKILGAEEKIHQLETQLFEQLVNWIATYIKHVQLNANLIA
QLDCLTSFTQLAIDNKYVCPDLDESFDLEIKEGRHPVIEKQLPVGVPYITNDVYLDRETQ
QIIMITGPNMSGKSAILRQTALIVLMAQMGSFVPAESVRMGVVDKIFTRVGASDNISMGE
STFMVEMNETASILNNISERSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPNKPKTLFA
THYHELNEMEVTFDRIQNYNVSVKELKDTVLFIRKLVKGGSAHSFGIHVAKMAGIPQIVI
QKAQKLLKQLEKRHSSEELSGIKSASDELQLSFFNLDDPLLEEIKEEIVNIDINTLTPVE
ALMKLNEIKRMLVKK
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatataacgaaattaaaaacaagtatccagatgcttgtttgctgtttcgcgta
ggcgatttctatgaaacttttggagaagatgctgttcgtgctgcaggaattttaggaatt
actttaaccaagcgtggagcaggaagcgatagcgaaactgcgttagcgggtttcccacac
cattcattaaatacctatttacctaaattggttaaggctggacttcgagtggcgatttgc
gatcaattagaagatccaaaaatgacaaaaacgattgtaaaacgtggtgttacagaattg
gttacaccaggtgtttcgatgaatgatgaggtgttgcattcgaagtcaaataacttttta
gcttcggttcattttggaaagaaaacggttggggtgtcatttttagatgtgtcaacaggc
gaatttttagtagcccaaggcaatgaagaatacatcgataaattgttgcaaaacttccgt
ccaagtgaaattttaattccaaaacagtttaaaaatcaatttcattctgtttttggagac
gattttcatacgttctttttggaagattgggtatataaggaagattatgcgttagaaagt
ttgacgaaacattttcaaaccaattcaatgaaaggctttggtgtggaagaattaaccgaa
ggtttgattgcttcgggggctattttgtattatttatcagaaacgcaacataataaaatt
cagcatatcacaaacattcaacgtattgccgaagacgcttacgtttggatggataaattt
accattcgaaatttagaattatatcacagttataatcctaatgcagtaacacttttagat
gtgattgataaaacgctttcgccaatgggtgcaaggcttttgaaacgttggttagcactt
ccgttgaaagatatttcaaaaattagaagtcgtcatgaagtgatttcgtatttgaaatcc
aatcccgaagttttacaacaaattcaatatcaaatcaagcaaatttccgatttggagcgt
ttgatttcaaaagtagctactggaaaaatttcgccaagagaagtgaatttcttgaaagat
tcattagatgctataattccgattaaaactttggctttagcaagttcaaatgaagctttg
agagtaattggagatagtttacatgcttgtgaattgttgcgtgagaaaataaaaaccact
attcaagaagacgcacctgtaagcgtaaataaaggaaatgcaattgctgttggcgttcat
ccggaattagatgaattgcgaaatatttcatctacaggaaaagggtatttggaagcatta
gaacaaagagaaagtgctgcaacaggaattccttccttaaaagtgtctttcaataatgtt
tttggttattacattgaagttcgaaatacgcataaagataaagttccggcggaatggatt
cgcaaacaaactttggttaatgcggagcgatatattacagaagaactaaaagaatacgaa
tcgaagattttaggtgcagaagaaaaaatccatcaattggaaacgcagttgtttgagcaa
ttggtaaattggattgcgacatacatcaaacatgttcagttgaatgctaatttaatagcg
caattggattgtttgacttctttcacacagttagcaattgataacaaatacgtttgtccc
gacttagatgaaagttttgatttggaaatcaaagaaggtcgccatcccgttattgaaaag
caattgcctgttggagtgccttacataacgaatgacgtgtatttagacagagaaacccaa
caaattatcatgattaccggtccgaatatgtcgggtaaatcggcaattttgcgtcaaacg
gctttgattgtgttgatggcgcaaatgggaagttttgttccagcagaaagcgtgagaatg
ggtgtggtcgataaaattttcactagagttggagctagtgataatatttcaatgggtgaa
tctacttttatggtggaaatgaacgaaactgcttctattttgaataatatttcggaaaga
agtttagtattgttagatgaaattggaagaggaacttcaacttacgatggaatttcgatt
gcttgggcaatttcagaatatttgcacgaacatccgaataaaccgaaaacactttttgct
acgcattatcatgaattaaatgaaatggaagttacgtttgatagaattcaaaattataat
gtttcggtaaaggaattaaaagatactgttttattcattcgcaaattagttaaaggtgga
agtgcgcatagttttggtattcacgtagcaaaaatggctggaatacctcaaatagtaatt
caaaaagcacaaaaactattaaaacagttagagaaaagacattcgagtgaagaattatcg
ggaataaaatccgcaagtgatgagttgcaattgagtttcttcaatttagatgatccgctt
ttagaagaaattaaagaagaaattgtgaatattgacatcaacacattaactccggttgaa
gcattgatgaagttgaacgaaataaaacgaatgttggtaaaaaaataa
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