Flavobacterium cyclinae: LOS86_02875
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Entry
LOS86_02875 CDS
T08416
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
fcc
Flavobacterium cyclinae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_50
MCM
HTH_23
HTH_28
Mga
Mg_chelatase
HTH_17
AAA_16
HTH_11
nSTAND3
HTH_29
Motif
Other DBs
NCBI-ProteinID:
UGS21586
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Position
complement(609196..610449)
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AA seq
417 aa
AA seq
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MESVQAIKQRFEIIGNDPKLNRAVEKAIQVAPTDISVLVTGESGVGKESIPKIIHALSHR
KHGKYIAVNCGAIPEGTIDSELFGHEKGSFTGATNTREGYFEVADGGTIFLDEVGELPLT
TQVRLLRVLENGEFIKVGSSQVQKTNVRIVAATNVNMFDAIEKGKFREDLYYRLSTVEIA
LPPLRERKDDIHLLFRKFASDFAHKYKMPAIKLDDSAVELLLKYRWSGNIRQLRNVAEQI
SVLETKREISSQTLLSYLPMENPNLPSVIGTPKSESDFSNEREILYKVLFDMKSDLNDLK
KLTLELMQNGSSKVQEANKGLIQKIYGKPEENAIFEEEPRVEMLPNQNNLIQEEFDDDEN
YLFAETVDEEETLSLEAKEIELIKKSLERNKGKRKAAADELGISERTLYRKIKQYDL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagtacaagctataaaacaacgatttgaaattattgggaacgacccaaaactc
aatcgtgccgtggagaaagccattcaggttgctccaacggatatttcggtattggtaaca
ggtgaaagtggtgttggaaaagaaagtattccaaaaattattcacgcgctttcgcacaga
aaacatggaaaatatattgcggtaaactgcggtgctattccagaaggaaccattgatagt
gaactttttggacatgaaaaaggttcgtttactggtgcaactaatacgcgtgaaggttat
tttgaagttgccgatggcggaactatatttttagatgaagtcggcgaattacctttaact
actcaagtacgtttattacgtgttttggaaaatggtgaatttatcaaagtaggttcatcg
caagtacaaaaaacgaatgttagaatcgtagcggctacgaatgtgaatatgtttgatgca
attgaaaaaggaaaattccgtgaggatttatattatcgcttgagtacggttgaaattgca
ttgccaccgcttcgtgaacgcaaagacgatattcatttgttgtttagaaaatttgcttct
gattttgctcataaatataaaatgcctgctatcaaattagatgacagcgctgttgaatta
cttttaaaatatcgttggagcggaaacattcgtcaattaagaaatgtagccgaacaaatt
tcggttttagaaacaaaacgcgagatttcatcacaaacacttctctcctatttaccaatg
gaaaatccgaatttaccatcggttattgggacaccaaaatcggaaagtgattttagtaac
gaaagagaaattttgtacaaagttctttttgatatgaagagcgatttgaacgatttgaag
aaactaacgttagagttaatgcaaaacggaagttctaaagttcaagaagcaaataaagga
ttaattcaaaaaatttatggcaaacccgaagaaaatgctatttttgaagaagaaccaaga
gtagaaatgcttccaaatcaaaacaatctgattcaagaagagtttgatgatgatgaaaat
tatttatttgctgaaactgttgatgaagaagaaactttgagtttagaagccaaagaaata
gaattaatcaaaaaatcgttagaacgaaacaaaggaaaacggaaagcggctgctgacgaa
ttaggaatttcagaacgcacattatacagaaaaattaaacaatacgatttataa
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