Flavobacterium cyclinae: LOS86_05050
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Entry
LOS86_05050 CDS
T08416
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
fcc
Flavobacterium cyclinae
Pathway
fcc00280
Valine, leucine and isoleucine degradation
fcc00650
Butanoate metabolism
fcc00907
Pinene, camphor and geraniol degradation
fcc01100
Metabolic pathways
fcc01120
Microbial metabolism in diverse environments
fcc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LOS86_05050
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LOS86_05050
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LOS86_05050
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LOS86_05050
Enzymes [BR:
fcc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
LOS86_05050
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Hydrolase_6
Motif
Other DBs
NCBI-ProteinID:
UGS21989
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All DBs
Position
1057625..1058488
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AA seq
287 aa
AA seq
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MNEIKIIECPRDAMQGIKPFIPIEKKVKYIQSLLRVGFDTIDFGSFVSPKAIPQMQDTVE
VLAQLDLSATNSKLLAIIANTQGAQNASVHKEIQYLGFPFSISENFQMRNTHKTIAESLV
TLQEILEIADKSNKEVVTYISMGFGNPYGDPWNVEIVGEWTEKLANMGVKILSLSDTVGS
STPEVIDYLFSNLIPKYPNIEFGAHLHTTPGKWFEKIDAAYNAGCRRYDGAIQGFGGCPM
AKDDLTGNMPTEKLLSYFTTKRENTNTSPMSFESAYNEATKLFGEFH
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaatcaaaattatcgagtgtccgcgcgatgccatgcaaggcattaaaccgttt
attcctatcgaaaaaaaggtaaaatacattcaatcgttattgcgtgtaggctttgatact
attgattttggaagttttgtttcgccaaaagcgattccgcaaatgcaagatacggttgag
gtattagcacaattagatttgtcagcaacgaacagcaaattgttagcgattattgccaat
acacaaggcgctcaaaatgcttcggttcacaaagaaattcaatatttaggatttccattt
tcgatttcggaaaactttcaaatgcgaaatacgcacaaaacaattgcggaaagtttggtt
acgctacaagagattttagaaatcgctgataaatcaaataaggaagtggttacctatatt
tcaatggggtttggaaatccgtatggagatccatggaatgttgaaattgttggcgaatgg
accgaaaaattagcgaatatgggtgtgaaaatcctatcgctttcggataccgttggaagt
tccactcctgaagttattgattatttgttttccaatttgattccgaaatatccaaacatt
gaatttggtgcgcatcttcacactacgccaggcaaatggtttgaaaaaattgatgcggct
tacaatgcaggttgtcgtcgttatgatggcgcgattcaaggttttggtggttgtcctatg
gcaaaagatgatttaacaggaaacatgcctacggagaaattgttgtcgtatttcactacc
aaaagagaaaatacgaatacgagtccaatgagttttgaaagtgcttataacgaagcgaca
aaattatttggcgagtttcattaa
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