Flavobacterium cyclinae: LOS86_05330
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Entry
LOS86_05330 CDS
T08416
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
fcc
Flavobacterium cyclinae
Pathway
fcc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LOS86_05330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcc02000
]
LOS86_05330
Transporters [BR:
fcc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LOS86_05330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_29
AAA_15
DUF5906
AAA_30
DUF87
AAA_16
Dynamin_N
AAA_23
Zeta_toxin
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UGS22044
LinkDB
All DBs
Position
complement(1115715..1117466)
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AA seq
583 aa
AA seq
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MKLIKSNSLKKVLLYAKPYQKRFNWVIVWAILLSIFAAARPYLLKQTVDEYIKPEDKHGL
LLYVVLMAVVLLLEVLAQFYFTYWANWLGQDIIKDIRDKLFHHITSFKMKYFDNEPVGKL
VTRSVSDIESIASIFSQGLFMIVSDVLKMIVILGIMFFMNWKLSLIVLLAMPVLIYATDI
FQKKMKVAFNEVRNEVANLNTFVQERLTGMKIVQLFNREAIELEKFKEINQKHNKAWLKN
ILYNSIFFPIADIVSSLTLGAIVYYAGISIINGDTLTTVGDLFAYTMLINMLFNPLRQIA
DKFNVMQMGIIAADRVFEILEKDENVQDKGTVEASHFKGFIQLKDVRFSYIKDEEVLKGI
NLEVQPGETIAIVGSTGAGKSTIINLLNRFYEIDSGEITIDNRNINEYTLESLRKQIAIV
LQDVFLFADTIYNNITLHNEAITREDVIIAAKKIGVHDFIMSLPEGYDYNVKERGVMLSS
GQRQLIAFLRAYVSNPSILILDEATSSIDTHSEELIQKATETITKDRTSIVIAHRLATVI
NASKIIVMDKGQIVEFGTHSELVNKPNGYYKKLYDSQFAVEVE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcattaaatccaattcattaaaaaaagtattgctctatgcgaagccttaccaa
aaaaggttcaattgggtaatcgtttgggctatcttactttctattttcgctgcagcgcgt
ccgtatttattgaaacaaacggtagacgaatacatcaaacctgaagataaacacggatta
cttctctatgtagttttaatggcagttgtacttttgttagaggttttagcacaattttac
tttacctattgggcaaattggcttggacaagacattattaaagacattcgcgataaatta
ttccatcatatcacttcgtttaagatgaagtattttgataatgaacctgttgggaaattg
gtaacgcgctcggtttcggatattgaatcgattgctagtattttcagtcaaggtttgttt
atgattgtaagtgatgtgcttaaaatgattgtgattttaggaatcatgttcttcatgaac
tggaaattatcattaatcgtactcttggccatgccagtcttaatttacgctactgatatt
tttcaaaagaaaatgaaagtggcttttaacgaagttcgaaacgaagtagccaacctaaat
acttttgtacaagagcgattaaccggaatgaaaattgtacaattgtttaatagagaggcg
attgaacttgaaaaatttaaagaaatcaatcaaaagcacaacaaagcttggttgaaaaat
attttgtataactccatcttcttccctattgctgatattgtttcatcgttaactcttggt
gcgattgtctattacgctggaatttccattataaatggtgacacattaaccactgttgga
gatttattcgcttatacaatgttaatcaacatgttattcaacccattacgccaaattgct
gataaattcaacgtaatgcaaatgggaattattgctgcagatagagtttttgaaatttta
gaaaaagacgaaaacgttcaagacaaaggaacagttgaagcctcacattttaaaggattc
attcaattgaaagacgttcgttttagctatattaaagatgaagaagttttaaaaggcatt
aatttagaagtacaacctggcgaaactattgctattgtaggaagtaccggtgctggaaaa
tcgactatcatcaatttattgaatcgtttttacgaaattgattcgggcgaaattactatt
gataatcgtaatattaacgaatacactttagaaagtcttcgtaagcaaattgcgattgta
ttgcaagatgttttcttatttgcggataccatttacaacaatattacactacataacgaa
gcgattactagagaagatgtaatcattgcagcaaagaaaattggggtgcacgattttatc
atgagcttacctgaaggctacgattataacgttaaggagcgtggtgtaatgctttcttct
ggccaacgccaattgattgcctttttaagagcatacgtgagtaatccaagtattttaatt
ttggatgaagcgacttcgtcaatcgacacacattctgaagaactaattcaaaaagctacg
gaaaccattactaaagatagaacttctatcgtaattgctcaccgattagcgactgtaatc
aacgcgagtaaaatcattgtaatggataaagggcaaatcgtagaattcggaacacatagc
gaattggtgaataagccaaatggttattataagaaattgtacgattcgcagtttgctgtg
gaggttgagtag
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