Flavobacterium cyclinae: LOS86_05620
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Entry
LOS86_05620 CDS
T08416
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
fcc
Flavobacterium cyclinae
Pathway
fcc03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LOS86_05620 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
fcc03011
]
LOS86_05620 (rpsA)
Ribosome [BR:
fcc03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LOS86_05620 (rpsA)
Bacteria
LOS86_05620 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
DUF5666
Motif
Other DBs
NCBI-ProteinID:
UGS22100
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All DBs
Position
1181308..1183071
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AA seq
587 aa
AA seq
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MSEINKTQEEFLANFNWHNYAEGIDAVDEKNLQEFEALVEKTFVSTGDEEVVEGVVVRIT
DRDAIVDINAKSEGVISLNEFRYNPNLKVGDKVEVLIDVREDKTGQLVLSHRKARTIKAW
DRVIAANESGEIVNGFVKCRTKGGMIVDVFGIEAFLPGSQIDVKPIRDYDQYVNKTMEFK
VVKINHEFKNVVVSHKALIEADIEVQKKEIIGQLEKGQVLEGVVKNITSYGVFIDLGGVD
GLIHITDLSWSRINHPSEVLELDQKLNVVILDFDDEKTRIQLGLKQLNAHPWDALAADLK
VGDKVKGKVVVLADYGAFIEVAEGVEGLIHVSEMSWSTHLRSAQDFMKIGDEVEAVVLTL
DREERKMSLGIKQMTQDPWTDITAKYPVGSKHTGIVRNFTNFGIFVELEEGIDGLVYISD
LSWTKKIKHPSEFVNVGDKLDVVVLELDVEGRKLSLGHKQTTANPWDKYEDAFAVGTNHN
GTISEIVDKGATVEFGDDIVAFIPTRHLEKEDGKKLKKGDTADFKVIEFNKEFKRVVASH
TAIFREEEEKNVKAAVETTSAPAQTSTLGDNNDILAELKAKMEKGGK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaattaacaaaacacaagaagagtttttagcgaattttaactggcacaactat
gcagaaggtatcgatgcagttgacgaaaaaaacttacaagaatttgaagctttagtagaa
aaaactttcgtatctacaggagacgaagaagttgttgaaggagttgttgtaagaatcaca
gatagagatgctatcgttgatatcaacgctaaatcggaaggtgttatctctttaaacgaa
ttccgttacaatcctaacttaaaagttggtgataaagtagaagtattaatcgacgttcgt
gaagacaaaacaggtcagttagtattatcacacagaaaagctagaactatcaaagcatgg
gatagagttatcgcagctaatgagtctggtgaaatcgttaacggtttcgtaaaatgtaga
actaaaggaggtatgatcgttgacgtattcggaatcgaagcgttcttaccaggttctcaa
attgatgtaaaaccaattcgtgattacgatcaatacgtgaacaaaactatggaattcaaa
gtagttaaaattaaccacgaattcaaaaacgtagtagtatcgcacaaagcgcttatcgaa
gctgatatcgaagttcagaaaaaagaaattatcggtcagttagaaaaaggtcaagtatta
gaaggtgttgttaaaaacattacttcttacggtgtattcatcgacttaggaggtgtagac
ggattaatccacatcactgacttatcttggtcaagaattaaccacccatctgaagtatta
gaattagaccaaaaattaaacgttgtaatccttgatttcgatgatgagaaaacaagaatt
caattaggtttaaaacaattaaacgctcacccatgggatgctttagctgctgacttaaaa
gtaggagataaagtaaaaggtaaagtagtagttttagctgattacggtgcattcatcgaa
gtagctgaaggtgttgaaggtttaatccacgtttctgaaatgtcttggtctactcactta
agaagtgctcaagatttcatgaaaattggtgacgaagtagaagcagttgttttaacttta
gacagagaagaaagaaaaatgtctttaggtatcaaacaaatgacacaagatccttggaca
gatatcacagctaaatacccagtaggttctaaacacactggaatcgttagaaacttcaca
aacttcggaattttcgtagagttagaagaaggtatcgatggtttagtatacatctctgat
ttatcttggactaagaaaatcaaacacccatctgaattcgtaaacgtaggggataaatta
gacgtagtagtattagaattagacgttgaaggtcgtaaattatctttaggtcacaaacaa
actacagctaatccttgggataaatacgaagatgctttcgctgtaggaactaaccacaac
ggaacaatttctgaaatcgttgacaaaggggctactgtagaattcggtgacgatatcgtt
gctttcatccctacacgtcacttagaaaaagaagacggtaaaaaattgaaaaaaggagat
actgctgatttcaaagtaattgagttcaacaaagaattcaaaagagtagtagcctctcat
acagctatcttcagagaagaagaagagaaaaacgttaaagcagcagttgaaacaacttca
gctccagctcaaacatctactttaggtgataataacgatattcttgctgaattaaaagct
aaaatggaaaaaggaggtaaataa
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