KEGG   Flavobacterium cyclinae: LOS86_05865
Entry
LOS86_05865       CDS       T08416                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
fcc  Flavobacterium cyclinae
Brite
KEGG Orthology (KO) [BR:fcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fcc03016]
    LOS86_05865
Enzymes [BR:fcc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     LOS86_05865
Transfer RNA biogenesis [BR:fcc03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    LOS86_05865
 Prokaryotic type
    LOS86_05865
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B_4 Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: UGS22147
LinkDB
Position
1235042..1235947
AA seq 301 aa
MKLQILGCYAATPRTITNPTSQVLDIKNHMFLIDCGEGTQVQLRKHKIKFSRINHIFISH
LHGDHFYGLIGLISTFMLLNRENDLHVYGPKGIKEIILLQLRASGSFTGYNLYFHELESK
ESEVIFEDETVIVKTIPLNHRVYTNGFIFQEKLGKRHLNVEAVAKYKIEKVYFDKIKSGG
NVTLDSGELIDNELLSFPPDAPMSYAFCSDTMYDESIVSIIKDVDVLYHESTFLDSEMQY
TEKTKHATAKEAAKIAKLANAKNLILGHYSTRYGSIEPFKTEAQTIFENVLLADDGREFE
F
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaactacaaatactcggttgttacgcagccactcctagaaccattaccaatcctacc
tcacaagttttagacataaaaaatcatatgtttttaattgattgtggtgaaggaacacaa
gtgcaattgcgcaagcataaaatcaagttttctcgcattaatcatatttttatttcgcat
ttacatggagaccatttttatggattaataggtttgatttcaacgtttatgttgttaaat
cgcgaaaacgatttgcacgtttatggtccaaaaggaatcaaagaaattattttattgcaa
ttgcgagcttcgggttcgtttacggggtataatttgtatttccacgaattagaatccaag
gaaagcgaagtcatttttgaagacgaaaccgtaattgtaaaaacgattccattaaatcat
cgtgtttatacgaatggttttatatttcaagaaaagctaggaaaacgccatttgaatgta
gaagcggttgccaaatataaaattgaaaaagtgtatttcgataaaattaaatccggtggt
aatgtaacgttagactcaggcgaattgattgacaatgaattgctttcgtttccgccagat
gctccaatgagttatgctttttgtagcgatacaatgtatgatgaatctatcgtttcgatt
atcaaagatgttgatgtgttgtatcacgaatctactttcttagattcggaaatgcaatac
accgaaaaaaccaaacacgcaacggcaaaagaagcggctaaaatcgcaaaattagcgaat
gctaaaaatttaattttaggacattattctacacgttacggttctattgaaccatttaaa
acagaagcacaaacgatttttgaaaatgtgcttttggcggatgatggtagagaatttgaa
ttttaa

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