Flavobacterium cyclinae: LOS86_06315
Help
Entry
LOS86_06315 CDS
T08416
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
fcc
Flavobacterium cyclinae
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
fcc03110
]
LOS86_06315
Chaperones and folding catalysts [BR:
fcc03110
]
Heat shock proteins
HSP100
LOS86_06315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
Sigma54_activat
AAA_16
nSTAND3
AAA_22
TniB
UVR
RuvB_N
AAA_14
AAA_7
Torsin
Zeta_toxin
IstB_IS21
AAA_18
DUF815
ABC_tran
ResIII
TsaE
Roc
DNA_pol3_delta2
ATPase_2
AAA_25
DUF87
Motif
Other DBs
NCBI-ProteinID:
UGS22235
LinkDB
All DBs
Position
complement(1333178..1335730)
Genome browser
AA seq
850 aa
AA seq
DB search
MDDNFSPRVRDVITFSKEEALRLGHDFIGTEHLMLGILRDGNGKAINILNNLGVDLSHLR
KKVEILSPANPNGIVNLEKQNLHLTRQAERALKTTFLEAKLFNNSEISTAHLLLCILRNE
NDPTTKLLNKIKIDYESVKEQYTAMMTNEDDYLENLPKAESFNDDSGQDDSLKDSGFSNT
PPSGNKTNKKSKTPVLDNFGRDLTEMAEEGKLDPVVGREKEIERVSQILSRRKKNNPLLI
GEPGVGKSAIAEGLALRIIKKKVSRNLFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNE
LEKNDDIILFIDEIHTIVGAGGATGSLDASNMFKPALARGEIQCVGATTLDEYRQYIEKD
GALERRFQKVIVEPTSVEETIMILNNIKPKYEDHHNVIYTPEAIEACVKLTNRYMTDRFL
PDKAIDALDEAGSRVHIINIDVPKQILELEKKLEEVRELKNTVVKKQKYEEAAKLRDDEK
RIEKDLAIAQEQWEEDSKNNKVTVTEDNVADVVSMMTGIPVNRIAQTESNKLAHLPELIK
GKVIGQDEAVQKIAKSIQRNRAGLKDPNKPIGSFIFLGQTGVGKTQLAKVIAKELFDSED
ALVRIDMSEYMEKFAISRLVGAPPGYVGYEEGGQLTEKVRRKPYCVVLLDEIEKAHPDVF
NMMLQVLDDGHLTDSLGRKIDFRNTIIIMTSNVGARQLKDFGTGVGFGTAAKQAQTEEHS
KGIIENALKKAFAPEFLNRIDDVIVFNALEKHDIDKIIDIEMDKLYARVKDLGYTLILSE
KAKDFIADKGFDKQFGARPLKRAIQKYVEDALAEEIITHKIHEGDQIYMDLDESSQELKI
EIKKLEEPSS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggacgataatttttcaccaagagttagagatgtaattactttcagtaaagaagaagcc
ctaagattaggacacgactttattggaacagaacatttaatgcttggaattttaagagat
ggcaatggaaaagctataaatattttaaataatttaggagtagatttatcgcatttaaga
aaaaaagttgaaattcttagcccagccaatcctaatggaattgtaaatctagagaaacaa
aacctacaccttacaagacaagccgaaagagctttaaaaacaacttttttagaagcaaaa
ctttttaataattcagaaataagtacagctcatctcctactttgtattttaagaaatgag
aacgaccctaccactaaattattaaataaaattaaaattgattatgaatccgttaaagaa
caatatacagccatgatgacaaacgaagacgattacttagaaaacttacctaaagcagag
tcgtttaatgacgattcaggacaagatgacagtctaaaagatagcggatttagcaatacg
ccaccttctggtaacaaaaccaataaaaaatctaaaacacctgttttggataactttggg
cgcgatttaactgaaatggctgaagaaggaaaactagaccctgttgtaggacgcgaaaaa
gaaattgagcgtgtttctcaaatcttaagtcgtagaaagaaaaacaaccctcttttaatt
ggagagcctggagttggaaaatcagcaattgctgaaggtttagcattacgaattatcaag
aaaaaagtatctcgtaatttattcaataaacgtgttgttacacttgatttagcaagttta
gttgccggaacaaaataccgcggacaattcgaagaacgaatgaaagcggtaatgaatgaa
ttagagaaaaatgatgatatcatcttattcattgacgaaattcacactattgttggtgcg
ggaggagcaaccggttccttggatgcttctaatatgtttaaacctgctttagcaagaggc
gaaattcaatgtgttggagcaacaactttagatgaataccgccaatatatcgaaaaagat
ggtgcattagaaagacgttttcaaaaggtaattgtagagccaacatcggttgaagaaacg
attatgattttgaacaacatcaagccgaaatacgaagaccatcataatgtaatttacact
ccagaagctattgaagcttgtgttaaattaacaaatagatacatgactgaccgttttctt
ccagacaaagcaattgatgctttagacgaagctggttcacgtgttcatattataaacatt
gatgttccaaagcaaattttggaattagaaaagaaattagaagaagttcgcgagcttaaa
aataccgttgttaaaaaacagaaatacgaagaagctgcaaaactacgcgatgatgaaaaa
cgcattgaaaaagatttagcaatagctcaagaacagtgggaagaagattctaaaaacaat
aaagtaaccgttacagaagacaatgtagctgatgtagtttctatgatgacaggaattcct
gtaaatcgtattgcccaaactgaaagtaataaattagctcacttgcctgaattaattaaa
ggtaaggtaattggacaagatgaagcagttcaaaaaattgcaaaatctattcaaagaaat
cgtgctggtttaaaagatccaaacaaaccaattggttcgtttattttcttaggtcaaacc
ggtgttggaaaaacgcaattggcaaaggttatcgcaaaagaattattcgattctgaagac
gcattagtccgtatcgatatgagtgaatacatggaaaaatttgcgatttcaagattagtt
ggtgcccctccaggatacgttggatacgaagaaggtggtcaattaactgaaaaagtaaga
agaaaaccatattgtgtagtgcttttagacgaaatcgaaaaagcgcatccagacgttttc
aacatgatgcttcaagttttagatgacggacatttaacagatagtttaggtcgtaaaatc
gattttagaaatacgattattatcatgacttcaaacgttggcgcacgtcaattgaaagat
tttggtacaggagttggattcggaaccgcagctaaacaagcacaaaccgaagaacattct
aaaggaatcattgaaaatgcattgaaaaaagcgtttgctccagaattcttaaatcgtatt
gatgatgttattgtattcaatgcattagaaaaacacgatatcgataaaatcattgatatc
gaaatggataaattgtatgctcgagtgaaagacttaggctacactcttattctttctgaa
aaagcaaaagattttatagctgataaaggttttgacaaacaatttggagcacgtccttta
aaaagagcgatacaaaaatatgtggaagacgctcttgctgaggaaatcatcacacacaaa
attcatgagggcgaccaaatttatatggatttagatgaaagctcacaagaacttaaaatt
gaaatcaaaaaattagaagaaccaagctcataa
DBGET
integrated database retrieval system
