Flavobacterium cyclinae: LOS86_08310
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Entry
LOS86_08310 CDS
T08416
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fcc
Flavobacterium cyclinae
Pathway
fcc00061
Fatty acid biosynthesis
fcc00071
Fatty acid degradation
fcc01100
Metabolic pathways
fcc01212
Fatty acid metabolism
fcc02024
Quorum sensing
fcc04146
Peroxisome
Module
fcc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LOS86_08310
00071 Fatty acid degradation
LOS86_08310
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LOS86_08310
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOS86_08310
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fcc01004
]
LOS86_08310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcc04147
]
LOS86_08310
Enzymes [BR:
fcc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LOS86_08310
Lipid biosynthesis proteins [BR:
fcc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LOS86_08310
Exosome [BR:
fcc04147
]
Exosomal proteins
Exosomal proteins of breast milk
LOS86_08310
Exosomal proteins of breast cancer cells
LOS86_08310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UGS20025
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All DBs
Position
1782982..1784757
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AA seq
591 aa
AA seq
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MKNITRLFDFPYYQLEKYNLKDALVTKYGDNWVKTSTQEYLDKANAISRGLLRLGVNKND
KIAIISSNNRTEWHITDIGVLQTGAQTVPMYPTISAEDYEYILNHSESQYVFVSDIEVYE
KLQSIKANVASLKDIYSYNDIDGCKSWKEVLELGADNSNQDEVEDRKNNVNTTDLATIIY
TSGTTGRPKGVMLSHQNIVSDVLMSAPRVPLRAGDTRALSFLPICHIFERMLTYLYQYYG
ISIYFAESIEKISDNLKEVKPHVMSVVPRLLEKVYDKIYAKGADLTGIKKALFFWALNLG
MEYKPYKQNGAFYEFKLKIARKLIFSKWQEGLGGELELLVSGSAALQTRLTKVFCAANIP
VMEGYGLTETSPVISVNDMRNSGFRVGTVGKVLDGVEVKIAEDGEILCKGPNVMMGYYKD
ETQTADVLKDGYFHTGDIGEIDTDGFLRITDRKKEMFKTSGGKYIAPQVLENTFKQSRFI
EQIMVIGDGEKMPAAFIQPNFEFVREWAHRHHDINVGSTNEELCSNKMVIDRIQEEIDHC
NEKFGNWEKVKRFELTPDVWSIDAGHLTPTMKLKRKIIKEKYSDLYQKIYG
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatataacacgtttatttgactttccttattaccaattagaaaagtataattta
aaggatgctttagtaactaaatatggggataattgggtaaaaacttccactcaggaatat
ttagataaagccaacgctatttcaagaggtttactaagattaggagtaaataaaaatgat
aaaattgctatcatttcttctaataacagaacagaatggcatattacagatattggcgtt
ttacagacgggtgctcaaacagttccaatgtatcccactatttctgctgaagattatgag
tacattttgaatcactctgaatcgcaatatgtttttgtttcagacattgaggtgtatgaa
aaattacaaagtataaaagcaaatgtagcttcattaaaagatatatattcttacaatgac
attgatggttgtaaaagttggaaagaagttttagaactaggagcagataattctaatcag
gatgaagttgaagatagaaaaaacaatgtaaatacaaccgatttagcaacaattatctat
acttctggtactacaggaagaccaaaaggtgttatgttaagtcatcaaaatattgtttcc
gatgtattaatgagtgctccaagagttcccctaagagctggtgacacaagagcgttgagt
ttcttacctatttgtcacatctttgaaagaatgttgacgtatttataccaatattatggt
atatcgatttacttcgcagaaagcatcgaaaaaatttctgataacttaaaagaagtaaaa
ccacatgtaatgtcggttgtaccaagattattagaaaaagtatacgacaaaatctatgca
aaaggagccgatttaactggaatcaaaaaagcgcttttcttctgggcattaaatttagga
atggaatacaaaccttataaacaaaatggtgccttctacgaattcaaactaaaaattgca
cgtaaactaatcttttctaaatggcaagaaggacttggtggcgaattagaattattggtt
tctggtagtgcagcattacaaactagattaactaaagttttttgtgcggctaatattcca
gtaatggaaggttatggtttaactgaaacttctcctgtaatttctgttaatgacatgaga
aattctggcttcagagtaggaactgttggaaaagttttggacggagttgaagttaaaatt
gctgaagatggtgaaatcttatgtaaaggtccaaacgttatgatgggctattacaaagat
gaaactcaaacagctgatgtactaaaagatggttatttccatacaggcgatattggtgaa
atcgatacagacggatttttaagaataacagatcgtaaaaaagaaatgtttaaaacttca
ggtggaaaatatattgctcctcaagttttagagaatactttcaaacaatcaagatttatc
gagcaaattatggtaattggggatggcgaaaaaatgccagctgcttttattcaacctaat
tttgaatttgttagagaatgggcgcaccgtcaccatgatataaatgtaggatctacaaat
gaagagttatgttcaaacaaaatggttatcgatagaattcaagaagaaattgatcattgc
aacgaaaagtttggtaactgggaaaaagtgaagcgttttgaattaactccagatgtttgg
tctattgatgcaggacacttaacacctactatgaaattaaaacgtaaaataattaaagaa
aaatattctgatttatatcaaaaaatttatggataa
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