Flavobacterium cyclinae: LOS86_09390
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Entry
LOS86_09390 CDS
T08416
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fcc
Flavobacterium cyclinae
Pathway
fcc00260
Glycine, serine and threonine metabolism
fcc00460
Cyanoamino acid metabolism
fcc00630
Glyoxylate and dicarboxylate metabolism
fcc00670
One carbon pool by folate
fcc00680
Methane metabolism
fcc01100
Metabolic pathways
fcc01110
Biosynthesis of secondary metabolites
fcc01120
Microbial metabolism in diverse environments
fcc01200
Carbon metabolism
fcc01230
Biosynthesis of amino acids
fcc01240
Biosynthesis of cofactors
fcc04981
Folate transport and metabolism
Module
fcc_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LOS86_09390
09102 Energy metabolism
00680 Methane metabolism
LOS86_09390
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LOS86_09390
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LOS86_09390
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LOS86_09390
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LOS86_09390
Enzymes [BR:
fcc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LOS86_09390
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
HEAT_SCC3-SA
Motif
Other DBs
NCBI-ProteinID:
UGS20235
LinkDB
All DBs
Position
complement(2010357..2011631)
Genome browser
AA seq
424 aa
AA seq
DB search
MQRDEQIFDLILDEQDRQIHGIELIASENFVSDQVMEAAGSCLTNKYAEGYPGKRYYGGC
EVVDIVEQIAIDRAKALFGAEYVNVQPHSGSQANTAVFAACLQPGDTILGFDLSHGGHLT
HGSPVNFSGKLYRPVFYGVEEETGVLNYDKIQEIALREKPKMIIAGASAYSRDMDFKRFR
EIADSVGALLLADISHPSGLIAKGLLNDPIPHCHIVTTTTHKTLRGPRGGMIMMGKDFEN
PWGLTTPKGEIRMMSHVLDMSVFPGNQGGPLMHIIAAKAVAFGEALTDEFFRYAMQVKKN
AQAMAEAFNKRGYKLISGGTDNHMMLIDLRNKGISGKDAENALVKAEITVNKNMVPFDDK
SPFVTSGIRVGTPAITTRGLVEEDMETVVALIDKVLMNHTDEAVLEQVAEEVNELMSERA
MFVF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacgaacaaatttttgacctaattcttgatgaacaagatagacaaattcac
ggaattgaattaattgcttctgaaaactttgtaagcgaccaagtaatggaagctgcaggt
tcatgtttaactaacaaatatgccgaagggtatcctggtaaaagatattacggaggatgt
gaagtggtagatattgtagaacaaatagcaattgacagagccaaagctttgtttggtgct
gagtatgtaaacgtgcaacctcactcaggttctcaagcaaatactgcggtttttgcagct
tgtttgcaaccaggtgataccattttaggatttgatttatctcatggtgggcacttaact
catggttctccagttaatttctcaggaaaattatatcgtcctgtattttatggagtagaa
gaagagacaggagtattgaattatgataaaattcaagaaattgctttaagagaaaaacca
aaaatgattattgctggagcttcagcttattctcgtgacatggattttaaacgatttaga
gagattgcagatagcgttggtgctttattattagccgatatttcacatccatctgggtta
attgcaaaaggtttattaaatgatccaattccacattgtcatattgtaactacaacgact
cataaaacattaagaggtccaagaggaggaatgattatgatggggaaagattttgaaaat
ccatggggattaaccactccaaaaggagaaatcagaatgatgtctcacgttttagatatg
tcggtttttcctggaaatcaaggtggacctttaatgcatattattgctgctaaagcagtt
gcttttggtgaagcattaacagatgagtttttccgttatgcaatgcaagtgaagaaaaat
gcacaagcaatggcagaagctttcaataaaagaggttataaattaatttcgggtggtaca
gataaccacatgatgttgattgatttaagaaacaaaggaatttctggtaaagatgctgaa
aatgcattagtaaaagcagaaattacagtaaataaaaacatggtgccatttgatgataaa
tcaccatttgtaacttctggtattcgtgtgggaactcctgcaattacaactcgtggttta
gttgaagaagatatggaaacagtggtagctttaatcgataaagtattaatgaatcatacc
gatgaagcagttttagaacaagttgctgaagaagttaatgaattaatgagcgaaagagca
atgtttgttttttaa
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