Flavobacterium cyclinae: LOS86_09470
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Entry
LOS86_09470 CDS
T08416
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fcc
Flavobacterium cyclinae
Pathway
fcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOS86_09470 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcc03400
]
LOS86_09470 (priA)
Enzymes [BR:
fcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOS86_09470 (priA)
DNA repair and recombination proteins [BR:
fcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOS86_09470 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
WHD_PriA_bact
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
HTH_65
Cas3-like_C_2
Penicillinase_R
nSTAND3
Nrap_D6
AAA_30
Zn_ribbon_TFIIB
RUBC_PIKBD
Motif
Other DBs
NCBI-ProteinID:
UGS20251
LinkDB
All DBs
Position
complement(2027398..2029848)
Genome browser
AA seq
816 aa
AA seq
DB search
MLYFIEVVLPLAVSKTFTYQVSEAEFHYIQIGMRVAVPFGKSKIFTALVLNKSNNPPQLY
EAKEIHQILDEKPVVNYHQIEHWKWIASYYMCSLGEVFRSALPAGYILESETIISAKDNS
EIDTNELKDDEYLILEALKSQTSITVQEVIKILGKKTVFPIINRLLAKGALVLQEEISEQ
YKPKLVRYIRLQDEFLQQERLAELLEVLSKAKKQRELVLHYFQLQAREKTPISVKKLIET
SGSSSAIVKSLVDKTIFEEYYIAQDRVAFNKEENSHFSLSEAQLSAFESIRENLKSYDVN
LLHGVTASGKTEIYIKLLEEYIKDGKQVLFLLPEIALTTQLVQRLTAYFGNEVAVFHSKY
TNNERIEVWNQVLENSPKAKVVIGVRSALFLPFSNLGCIIVDEEHEQTFKQQDPAPRYHA
RDAAIVLAKQHGAKVVLGSATPSLETFYNVQTKKYGLTELKVRYGNVVLPEIQLVDLKDK
YFRKKMSGHFSDELLEEITETLSKGEQVILFQNRRGFSPYVECMTCGHVPHCPSCDVSLT
YYKFKNQLRCHYCGYTIANPTHCHSCQSVDLTTKGFGTEQIEMELKTLFPEKNIGRMDQD
TTRGKFGFEKIIDSFKNREIDVLVGTQMLAKGLDFDNVTLVGILNADNLLNQPHFRAYER
AYQMMMQVSGRAGRSEKKGKVVIQTYNTYHNTIQQVLNNDYMGMYKEQIYERQNFKYPPF
FRLIKLTLKHRDFDKLKEGSMWLYNVLSQNLDMPVLGPEEPAINRIRNEYIRTIMVKIPV
QKHLGNTKKNIAKVLMSFEAISQYRSIKVKVDVDVY
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgctgtattttattgaagttgttttaccattagcggtatcaaaaacctttacttatcaa
gtttctgaagccgagtttcactacattcaaattggaatgcgagtagctgttccatttggt
aaatcaaagatttttacagcattggttttaaataaatcaaataatcctccccaattatac
gaagcaaaagagattcatcaaattttagacgaaaaaccagttgttaattatcatcaaatt
gaacattggaaatggatagcgtcctattatatgtgttcgttaggtgaagtttttcgtagt
gctttacctgcagggtatattttggagagcgaaactattatttcagctaaagacaattct
gaaattgacactaatgaattaaaagatgatgaatatctaattttagaagctcttaaaagt
caaacttcaataactgttcaagaagtaattaagattttaggaaaaaaaacggtttttcca
ataattaatcgattattagcaaaaggcgctttggttttacaagaagaaatatcagagcaa
tataaaccaaaactagttcgatacattagattacaagacgaatttctgcaacaagaaaga
ttggcagaattgttagaagtgttgtcaaaggcaaaaaaacaacgcgaattagttttgcat
tattttcaattacaagctcgagaaaaaacaccaatttctgtaaaaaaactaattgaaaca
tccggaagttcatcggctattgtaaaatctttggtagataaaaccatttttgaagagtat
tatattgcgcaagatagagttgcatttaataaagaagagaatagtcatttttcattaagt
gaagcacaattatctgcttttgaaagtattcgagaaaatttaaaaagttatgatgtaaat
ttattacatggtgttacagcttcgggtaaaacggaaatttatattaaacttttagaagaa
tatataaaagatggaaaacaagtgttatttctgttgcccgaaattgcattaaccacacaa
ttagttcagcgattaacggcttattttggaaatgaagttgctgtttttcattcgaaatat
actaataacgaacggatagaagtttggaatcaagttttagaaaattctcctaaagcaaaa
gtggttattggggttcgcagcgctttgtttcttccgttttctaatttaggatgtataatt
gtagatgaagaacatgaacaaaccttcaagcaacaagatcctgcaccacgatatcatgca
cgtgatgccgctatagttttagccaagcaacatggcgcaaaagtggttttaggaagtgcg
actccatctttggaaaccttttataatgtacaaactaaaaagtatggtttaactgaatta
aaagtgcgttacggaaatgtagtgttgcctgaaattcagttggttgatttaaaagataaa
tatttcagaaaaaaaatgtcggggcatttttccgatgaattattggaggaaattacggaa
acgttatcgaaaggtgaacaagtgatattgtttcaaaacagaagaggattttcaccttat
gtagaatgtatgacgtgtggacatgtgccgcattgtccaagttgcgatgtaagtctgact
tattataaatttaaaaatcaattgcgttgtcattattgtggttatactattgcaaatcct
actcattgtcatagttgtcaatcagttgatttaactactaaaggtttcggaaccgaacaa
attgaaatggaattgaaaaccctttttccagagaaaaacattggaagaatggatcaagat
actactcgtggaaaattcggctttgaaaaaattatcgattccttcaaaaatagagaaatt
gatgtattagttggaacacaaatgttagccaaagggttggattttgataatgttacgctt
gtaggaattttaaatgccgataatctgttgaatcagcctcattttagagcttatgaaaga
gcatatcagatgatgatgcaagtttcgggtagggcagggcgttcagagaaaaaagggaaa
gtggtaattcaaacgtataatacatatcataataccattcaacaggttttgaataatgat
tatatgggaatgtataaagagcagatttacgaacgtcagaattttaaatatccacctttt
tttagattgataaaattaactttaaagcatcgtgattttgataaattgaaagaaggttca
atgtggttgtataatgtattatcccaaaatttagatatgcccgttttgggtccggaagag
ccagcgattaatagaattcgtaatgaatatattcgaacaataatggttaaaattccggtt
cagaaacatttagggaataccaaaaaaaatattgcgaaagtactcatgagttttgaagca
atttcgcaatatcgatctattaaggttaaagtagatgttgatgtttattaa
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