Flavobacterium cyclinae: LOS86_10240
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Entry
LOS86_10240 CDS
T08416
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
fcc
Flavobacterium cyclinae
Pathway
fcc02024
Quorum sensing
fcc03060
Protein export
fcc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LOS86_10240 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LOS86_10240 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOS86_10240 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fcc02044
]
LOS86_10240 (secDF)
Secretion system [BR:
fcc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LOS86_10240 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
TBPIP_C
Motif
Other DBs
NCBI-ProteinID:
UGS20400
LinkDB
All DBs
Position
complement(2195253..2198180)
Genome browser
AA seq
975 aa
AA seq
DB search
MQNRGLIKFFAIIFALVCVYQLSFTFVANSVVSDAKAFAKGDTAKELRYLDSIGKEEVYP
VLGFTYNKVREQQINKGLDLEGGLNVILQISVKDVLKGLANNSKNKAFNQALADAKTNQQ
GNQDYIDAFFQAANAANVNLAAADVFGNRNLDDVIKFDMTNKQVEPIIKQKVQESVESAF
KVLRERIDKFGVTQPNIQLLGNSGRILVELPGAKDVDRIKKLLQSTAQLEFWETYKIEDV
GQYLMSVEDALKKTEVAVKEAPVKTSGIDSLLTDKADTTAAKNSPFLGKMIAPGMQGAPY
VGTFATKDTAAINAFFKRDDIKALLPANLANVKFAWGKTNAKTPDVTELYALKGTRDNVA
PLSGGVIVDARDTFDQLGKPAVSMQMNGNGARKWEQITGAVSQQGNAIAIVLDNIVYSAP
GVSKGAITGGQSEISGNFTIEETKDLANILRAGKLPAAAEIVQSEVVGPSLGQEAIDNGL
LSFIIGFSLVLLWMVVYYGKTGFYANLALLVNILFIFGTLASFGAVLTLPGIAGIVLTIG
MAVDANVIIFERAKEELDNGKSVQEATDYAFTWKGAMSSIVDANVTTAITAVILLVFGTG
PIRGFATTLLIGIFTSVVTAVFITRMFLDWSLSKNEKLAYSTSLTRTWFKNLNIDFLGKK
KMAYAISGILVALSIFSLATKGLNQGVDFVGGRTYQVRFDKAVSAPEVTADLVAVFESAE
AKIYGSNNQLKITTKYKVDQEGEGVDEEVNRKLYEGLKKHLPANLKYEEFANLYEGKQIG
ILSSAKVTGTISKDIKTNSLWAVLGSLFVVFVYLMISFRRWQFGFGAVAAVAHDVIIVLG
IFSFAYSFLPFNMEIDQAFIAAILTVIGYSLNDTVIVFDRVREYLDYNSSPDFKGLVNKA
LNTTLSRTINTSATTLVVLIAIFIFGGETIRGFVFAILVGILVGTYSSLFVATPVMTDAI
GEKEGRKMAEFKKED
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatagaggacttattaaatttttcgcaattatctttgctttggtatgtgtttac
cagctttcttttactttcgtagcgaatagtgtagtttctgatgcaaaagcttttgctaaa
ggagatacagctaaggaattacgttatttagattctatagggaaagaagaagtgtatcct
gttttagggtttacttacaacaaagtaagagaacaacaaatcaacaaaggtcttgactta
gaaggaggattaaacgttattcttcaaatttcggttaaagatgttttaaaaggattggca
aataattctaaaaataaagcattcaaccaagcgcttgctgatgcaaaaacaaatcaacaa
ggaaatcaagattacattgatgctttctttcaagcagcaaatgctgcaaacgtaaattta
gcagcagctgatgtttttggaaacagaaacttagatgatgttattaagtttgatatgact
aacaaacaagttgagccaattatcaaacaaaaagttcaagaatcagtagaaagtgctttc
aaagtattaagagagcgtattgataaatttggagttactcaacctaatattcaattgtta
ggaaattctggtagaatcttagttgagttgccaggagctaaagatgttgatcgtattaaa
aaattattacaaagtacagctcaattagagttctgggaaacgtataaaattgaagatgta
ggtcaatatttaatgtcagtagaagatgcattaaagaaaactgaagttgctgttaaagaa
gctccagttaaaacatcgggtatcgattcattattaactgataaagcagatacaacagct
gctaaaaatagtccattcttaggaaaaatgattgctccaggaatgcaaggtgctccatac
gttggaacttttgctactaaagatactgcagctattaatgcatttttcaaaagagatgac
atcaaagctttattaccagctaatttagctaatgtaaaatttgcttggggaaaaacaaat
gcaaaaactccagatgttactgagttatatgctttaaaaggaacaagagataatgtggcg
ccattaagtggtggagtaattgttgatgcaagagatacttttgatcaattaggtaagcct
gcagtttcaatgcaaatgaatggaaatggtgcaagaaaatgggaacaaattacaggtgct
gtttctcaacaaggaaatgcaattgcaattgttttagataacattgtgtattctgcgcca
ggagtaagtaaaggagctataacaggaggtcagtcagaaatttctggaaactttacaatc
gaagaaacaaaagacttggctaatattttaagagcaggtaaattaccagctgctgctgaa
attgttcagtcagaagtagtagggccatcattaggtcaggaagctattgataatggttta
ttatcattcatcatcgggttctctctagtacttttatggatggttgtttactatggtaaa
acaggtttctatgctaacttagcgttattagtaaatatcttattcatttttggaacatta
gctagttttggtgctgtattaacattaccaggtattgctggtattgtgttaacaataggt
atggcagttgatgcgaacgttattatctttgaaagagcaaaagaagagttagataatggt
aaatcagttcaagaagcaacagattatgctttcacttggaaaggtgccatgtcttcaatt
gtagatgctaacgttacaactgcaattacagctgttatattattagtttttggaacagga
cctatcagaggttttgcaactacattattaataggtatttttacttctgtagtaacagcg
gtatttattacaagaatgtttttagattggagtttaagtaaaaatgaaaaattagcttac
tcaacttcattaacaagaacttggttcaaaaacttgaatatcgatttcttagggaaaaag
aaaatggcttacgcaatttcaggaattttagttgctttaagtatcttttctttagctact
aaaggattaaatcaaggtgttgatttcgtgggaggtagaacctatcaagttcgttttgat
aaagcggtttctgctccagaagttactgcagatttagtagcggtttttgaaagtgctgaa
gctaaaatttatggtagtaataatcagttaaaaattactacaaaatataaagtagatcaa
gaaggagaaggagtagatgaagaagttaatcgtaaattatatgaagggttaaagaaacat
cttccagctaacttaaaatacgaagaatttgcaaacttatatgaaggaaagcaaataggt
attttatcttctgcaaaagtaacaggaacgatttcaaaagatattaaaacaaactcatta
tgggcagtattaggatctttatttgtagttttcgtttacttaatgattagtttccgtaga
tggcagtttggttttggtgcagttgctgcggttgctcatgacgtaattattgtattaggt
attttctcttttgcatattcattcttaccattcaacatggaaattgaccaagcatttatt
gctgcaattttaacggtaattggttattcattgaatgatactgtaattgtttttgacaga
gtacgtgaatacttagattataattcatctcctgattttaaaggattagtaaataaagcg
ttaaacactactttaagtagaacgattaatacttcggctactacattagtggtattgatt
gctatctttatctttggtggagaaacaattagaggattcgtatttgcaattttagtaggt
attttagtaggtacttattcttcattgtttgttgcaactccagttatgactgatgcaatt
ggtgagaaagaaggtcgtaaaatggctgaatttaagaaagaagactaa
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