Flavobacterium cyclinae: LOS86_10255
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Entry
LOS86_10255 CDS
T08416
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fcc
Flavobacterium cyclinae
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcc03032
]
LOS86_10255 (gyrB)
03400 DNA repair and recombination proteins [BR:
fcc03400
]
LOS86_10255 (gyrB)
Enzymes [BR:
fcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LOS86_10255 (gyrB)
DNA replication proteins [BR:
fcc03032
]
Prokaryotic type
DNA Topoisomerases
LOS86_10255 (gyrB)
DNA repair and recombination proteins [BR:
fcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LOS86_10255 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UGS20403
LinkDB
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Position
complement(2200427..2202367)
Genome browser
AA seq
646 aa
AA seq
DB search
MSEEVKKNNYSADSIQALEGMEHVRMRPSMYIGDTGVRGLHHLVYEVVDNSIDEALAGHC
DTIYVAINEDNSISVEDNGRGIPVDIHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSCVNALSDHLRATVHREGKIYEQEYERGKALYPVKQIGTTDKRGTIVTFKPDGTIF
TQTLEYSYDTLAARLRELSFLNKGITITLTDKRDIDDKGQPRTETFHSKEGLKEFVKFLD
GNRVPIIGHVISMENEKGEIPVEVALIYNESYTENIFSYVNNINTHEGGTHLQGFRMGLT
RTLKKYADASGLLDKLKFEISGDDFREGLTAIISVKVAEPQFEGQTKTKLGNREVVSPVS
QAVAEMLENYLEENPNDAKIIVQKVILAAQARHAAKKAREMVQRKTVMGGGGLPGKLSDC
SEQDPARCEIFLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMQHKVFENEEIRNI
FTALGVTVGTEEDSKALNLSKLRYHKVVIMCDADVDGSHIATLILTFFFRYMKELIENGH
VYIATPPLYMVKKGNKKEYAWNDDQRDLANERMGGSAAVQRYKGLGEMNAEQLWETTMNP
DFRTLRQVTIDSLSEADRIFSMLMGDEVPPRREFIEKNAAYAKIDA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaagttaagaaaaacaattattcggcagacagtattcaggcgttagaggga
atggagcacgtaagaatgcgtccttccatgtatattggagatactggagtaagaggttta
catcatttggtatatgaagttgttgataactcaattgatgaggctttagctggacattgt
gataccatttatgtagcaattaatgaagataattctatttctgttgaagataacggacgt
ggaattcctgttgatattcacaaaaaagaaggtgtttcagctcttgaagttgtaatgaca
aaaattggagctggaggtaagtttgacaaagattcgtataaagtttctggaggtcttcac
ggtgttggggtgtcttgtgttaacgcactttctgatcatttaagagctactgttcataga
gaaggtaaaatctacgaacaagaatacgaaagaggtaaagcactttatcctgtaaagcaa
attggaactacagataagcgaggaacaatcgttacttttaaacctgatggaacaattttc
actcaaactttagagtattcttatgataccttagcggctcgtttacgtgaactttctttc
ttaaataaaggaattactattacgttaacagataaacgtgatattgatgataaaggacaa
ccaagaactgaaacgttccattcaaaagaaggtttaaaagaattcgttaagtttttagat
ggaaaccgtgtgccaattattggtcatgtaatttcaatggaaaacgaaaaaggtgaaatt
ccagttgaggtagctttgatttataacgaaagttatactgagaatattttttcttacgta
aataatatcaatacacacgaaggaggaacgcacttgcaaggtttccgtatgggattaaca
cgtacgttgaaaaaatatgcagatgcttctggattgttagacaaattgaaattcgaaatt
tcgggtgacgacttccgtgaaggtttaacagcaattatttctgtaaaagttgccgaacct
caatttgaaggtcaaacgaaaaccaaacttggaaatagagaagtagtttctccagtttca
caagcagtagctgaaatgcttgaaaattatttggaagaaaatccaaatgatgccaaaatt
attgttcaaaaagtaattttagcagcacaagcacgtcatgccgctaaaaaagcgcgtgaa
atggttcaacgtaaaaccgttatgggcggtggaggtttgcctggtaaattatcagattgt
tctgaacaagatccagcaagatgtgaaattttccttgttgagggagattcggcaggtgga
accgcaaaacaaggtcgtgatagagcatttcaagctattttaccattacgtggaaagatt
ttgaatgttgaaaaagcaatgcaacataaagtgtttgaaaacgaagaaattcgtaatatt
ttcactgctcttggggtaactgtaggaacagaggaagatagcaaagcactgaatttgtca
aaattaagatatcataaagtagtcatcatgtgtgatgccgatgtcgatggttctcacatt
gcaacgttgattttaacgttcttctttagatatatgaaagagttaattgaaaacggtcac
gtttatattgcaactcctcctttatatatggtgaaaaaaggaaataaaaaagaatatgct
tggaacgatgatcaacgtgatttagctaatgaaagaatgggtggaagtgctgctgttcaa
cgttacaaaggtcttggagagatgaatgcagaacaattatgggaaactaccatgaaccct
gattttagaacgctacgtcaagtaactattgatagcttgtctgaagcagatagaatcttc
tctatgttgatgggggatgaagttccgccacgtagagagtttattgagaaaaatgcggct
tacgctaaaattgatgcgtaa
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