Flavobacterium cyclinae: LOS86_12680
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Entry
LOS86_12680 CDS
T08416
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
fcc
Flavobacterium cyclinae
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcc03032
]
LOS86_12680
03036 Chromosome and associated proteins [BR:
fcc03036
]
LOS86_12680
03400 DNA repair and recombination proteins [BR:
fcc03400
]
LOS86_12680
DNA replication proteins [BR:
fcc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LOS86_12680
Chromosome and associated proteins [BR:
fcc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LOS86_12680
DNA repair and recombination proteins [BR:
fcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LOS86_12680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
UGS20858
LinkDB
All DBs
Position
complement(2786607..2786900)
Genome browser
AA seq
97 aa
AA seq
DB search
MTKADIVAKISEKLGLEKGDVQATIESFMEEVKNSLETGDNVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKVFVESVKEKTEVTV
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcagacatcgtagcgaaaatttcagaaaaattaggacttgaaaaaggtgat
gtacaagcaactattgagtcttttatggaagaagtaaaaaactcgcttgaaacaggtgat
aatgtttatttaagaggttttggaagttttatcatcaaaacaagagctgaaaaaacagga
agaaacatttctaaaaacactacaattaaaattcctgctcacaacattccagcttttaaa
cctgctaaagtgtttgttgaaagcgttaaagaaaaaacagaagttacagtataa
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