Folsomia candida: 110842333 Help Entry 110842333         CDS       T05043                                  Name (RefSeq) 5'-3' exoribonuclease 1-like   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism fcd  Folsomia candida Pathway fcd03008   Ribosome biogenesis in eukaryotes fcd03018   RNA degradation Brite KEGG Orthology (KO) [BR:fcd00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     110842333   09123 Folding, sorting and degradation    03018 RNA degradation     110842333  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fcd03019]     110842333    03009 Ribosome biogenesis [BR:fcd03009]     110842333    03016 Transfer RNA biogenesis [BR:fcd03016]     110842333    03036 Chromosome and associated proteins [BR:fcd03036]     110842333 Messenger RNA biogenesis [BR:fcd03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      110842333   mRNA degradation factors    5'-3' decay     5' exonucleases      110842333 Ribosome biogenesis [BR:fcd03009]  Eukaryotic type   Pre-60S particles    RNases     110842333 Transfer RNA biogenesis [BR:fcd03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     110842333 Chromosome and associated proteins [BR:fcd03036]  Eukaryotic type   Gene silencing    piRNA pathway     110842333 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 Motif Other DBs NCBI-GeneID:  110842333 NCBI-ProteinID:  XP_021943746 LinkDB All DBs Position Unknown AA seq 1843 aa AA seqDB search MGIPKFYRWTSERYPCLSERIKEYQIPEFDNLYLDMNGIIHNCSHPNDEDIHLRIPEQQI FKDIFHYIDFLFKMIKPCKVFFMAVDGVAPRAKMNQQRGRRFRSARLAEDQEAEAIRQGE TLPSQERFDSNCITPGTEFMARLHEQLKYFVQVKVSTDPLWQRSGLVIYLSGHDVPGEGE HKIMDFIRHERSRADYEPVRHCLYGLDADLVMLGLSTHELQFSLLREEVKFSRPRKPKKG VKQAIPPKPNNDTANYDLTNVSIFKYDQNGVPGSLPTSSESAEIVESALLKEGQSFSDAI DKPLEQLSLRSEAPPASAHTSNKDDSAPPPPPEESGAKGFFKAPLPEKTTFLLLHLSLMR DYIDFEFQDLKKNLANHPNIQYDLESVIDDWILMNILVGNDFVPHLPHVHIVKGALPMLY QLYSQVLPTLDGYINENGLLNLRRFEIFINKLSQFDIETFRDTYDDMKYMESKTGKNIVL GEKMFEGFDFDGDNFTEEPLEPTMSPELKALAERTEEEVFGETKDGPGKLCTDVFGIDDK YFNSGDSPELRLEFLQHKRNYYISKLHFDEITPEFLQIFCKEYIRAIQWVLLYYYKGVSS WGWFYPYHYAPFCSDLKNFANFSIEFDIGNPFRPFEQLLAVLPAQSKKLLPNCYQWLMTD TKSPIVDFYPEKFEQDLNGKKQDWEAVVLIPFIDEQKLLDVMKIEEINLNREELHRNSKG TMMLCSYTPEETGPIKSASNLFPVLESSHVKIETMNDVTYDPLTLPKGIHPKTKKDTIYQ GFPTLKSKPINAIIDKADIKVFDFVTREESMILSLEDVKDDPADIAALSRKLIGRTVWVN WPHLTFAYVTGILTYKGKYFQDYAGKIMLDNELIGSRVEKEFNAIAKGLSQRHLKCKGIK LGEIKVIVYAKMMEGRKVRCNNSGDVEFETLWSKLQQPFALKTCMYEENITEIFYLDRQL AKSYTELFKIGDDVFYLGDKLFGALGTVVGYDVPKKSVLVDFKVVPGSNNNNSEVNLKSC VGHNILKSHDYFSSYAAAGKCQISSYVLSRITGTVFVSVEKETKANNKMLAKKAAALAKR GSGTDVSPTDASNSSSDDDFPALEMRKINVGLDLKFNKKNLEVRGYTSKRDGAWFYSGKA VQLVNEFVMEFSDFISFLSRVEKGRDVFDAGEFFPDKPLERINEMVEWLEEKGVRDLPRI PTNTKLLDDEDIDSVWKYILKHKSPSKKTTIKKWTVQPNFLLKPGLDRGCVPPIPHCSYT ILDRVICVDRGAPIPVGRRGTIVGIQTPQASEPEQIEESFKSTGAATLMTLIILCDPAAD VFDNPENVELSNSERKELSGTLASLLRITDPGQETVGFEMPKASKRSVSSDLKPRLIKLY PYQLLNLTEGPVTLRQSHKDSKQLQTITGFHMNGHVKQPQKLQELTQNRIVPLMSQSVGT IQSRSSAPGQSSSAKNNKDFVPFESKRVQASKQKQQLAPVPQDYTNKPSKPEQLNKAQIQ IMGRVSNNGTLDKTAKALPWPPQPLVKVEVPINESFSVAAFLQQQFNAAPINKQKEVHNK QQPPPAHPPVETAIKEPPLPEYMHAVPKPLMPAINVRPKQVNQSNPPKGCSEIFSAATAY HPPSVHPESIPVVQPTAAHGSQEPNQILEMLNKATTRHYNSKKPRSQQQQQSRKGKGPGP SAPPVNLPFSACRPPVPSPPSNWTQHRYAAPIVPTNSTNHPQREQRQHNFHSRQFVSQRF FVPLQVSRNASTASSKRQPNPRIPQTPSNNRAEQLPEKQLAGDSISQPGSSSKTSTETVS KKEPVLKLAPVEPQESAPTTSSAETSKPQGRKSRLAANFGNNC NT seq 5532 nt NT seq  +upstreamnt  +downstreamnt atgggtataccaaagttctatcgctggacgtcggaaagatacccttgtctttcggaaaga atcaaggaatatcaaattccagaatttgacaatttgtacttggatatgaatggaattatt cacaattgctcgcatccaaacgatgaagatatccatttgcgaatccctgagcagcaaata tttaaggatattttccactatattgattttttatttaagatgatcaagccctgcaaagtg tttttcatggctgtcgatggagttgctcctcgtgccaagatgaatcagcaacggggtcga cggtttaggtcggctcgacttgcggaagatcaagaagcagaggcgatccggcaaggagaa accttgccatcgcaggaacgatttgattctaattgtattacgccaggaaccgagtttatg gcaagattacacgagcagttaaagtattttgttcaagtcaaagtttctacggaccctcta tggcaaagatcaggacttgtgatctatttgagtggtcatgatgtacccggggaaggggaa cataaaattatggattttatccgacatgagcgttctagagcagattatgaacccgttcgt cattgtctttacgggttagatgctgatcttgtcatgcttggattatcaactcacgaacta cagttttcacttttaagagaggaagttaaattttcaagacctagaaaaccaaaaaaaggt gtaaaacaagcaattcctccaaagccaaataacgacactgccaattatgacttgacgaat gtgtcgatattcaaatatgaccaaaatggtgtccctggtagtttgccaacatcatctgaa tctgcagagattgttgaaagtgcattgctgaaagaaggacagtcattttctgatgcaatt gataaaccattagaacaattgtcattgcgttctgaggctcctcctgcttctgcacataca agcaacaaggatgatagcgcgccacccccaccccctgaagaatcaggagcaaaaggattt tttaaagctcccctacccgagaaaacaacatttcttttactacatctatcattaatgcga gactatattgactttgaatttcaagatttaaagaaaaacttggccaatcatccaaacata cagtacgaccttgagagcgttattgatgattggattttaatgaatattttggtcggcaac gattttgtccctcatcttcctcacgtacatattgtgaagggagctcttcccatgctgtat caactatattctcaagttctgcctactctcgacggttacattaatgaaaatggtttatta aatttacgccgatttgaaatttttattaataaattaagtcaatttgacattgaaacgttc cgtgacacatatgacgatatgaagtacatggaatcgaagacgggcaagaatatcgttctt ggagagaaaatgtttgaaggcttcgactttgacggagataactttacggaagagcctctg gaacccacaatgtctccagagcttaaagcattggcggaaaggaccgaagaggaagtgttt ggtgagacaaaggacggtccagggaaattatgcacggatgtgtttggtattgatgataaa tatttcaactctggcgattcaccggaattgaggctcgaatttcttcaacataaaagaaat tactacatttcaaaacttcactttgatgaaattactccagagtttttacaaattttttgt aaagagtacattcgagctatccagtgggtgcttttgtattattacaaaggtgttagctcc tggggttggttttatccataccactatgctccattttgttccgacttgaaaaattttgca aacttttcaattgaatttgacattggaaatccgtttcgcccatttgaacagttgctcgct gtcctgcccgctcaaagcaagaagttgcttccaaattgttatcagtggctaatgactgat acaaaatctccaattgttgacttttaccctgaaaaatttgagcaagatctgaatgggaag aaacaagattgggaagcagtcgtcctcattcctttcatagacgagcaaaagttattggat gttatgaaaattgaagaaatcaatttaaaccgagaagagttgcaccgcaattctaaagga acaatgatgttgtgcagctatacaccagaggaaactggtcctataaaatctgctagcaat ttgtttccagttttggagtcatcacatgtaaaaatcgaaactatgaatgatgttacatac gaccctctaactctaccaaaaggaattcaccccaaaacgaaaaaggacacaatctatcaa ggttttcccactttgaagtctaaaccgatcaatgctatcattgataaagctgacatcaaa gtctttgattttgtaactcgggaggagtctatgattctgagccttgaagacgtgaaggat gaccctgcagatattgcagccttgtcgaggaaacttattgggcgtactgtttgggttaat tggccccatttgacattcgcatatgtaactgggattttaacttacaaaggaaaatatttc caagattatgctgggaaaataatgcttgataacgagttaattggaagcagggtggaaaaa gagtttaacgcaattgcaaagggactttctcagcgacatttaaaatgcaaaggaatcaaa ctcggagaaatcaaagtgattgtgtatgcaaaaatgatggaaggtcggaaagtacgctgc aacaattctggtgatgtagaatttgaaaccctttggtcaaaacttcaacaaccttttgca ctgaaaacttgcatgtacgaagaaaatatcacagaaatattctatctggacaggcaactg gccaagtcatatactgaactatttaaaattggagacgatgtgttttatttgggggataaa ttgtttggggctcttggaacagtagtaggttatgatgtgccaaagaaatctgtgttagta gactttaaggttgtcccaggtagcaacaacaataatagtgaagtcaatttaaaaagttgt gtcggtcacaacatcttaaaaagtcacgattacttcagttcatatgcagcagccggaaag tgtcaaatcagttcctacgttctctccagaattactggcaccgtttttgtttctgttgaa aaagaaaccaaagccaataataaaatgttggcaaagaaagcagcagcactggctaaacgg ggatctggaaccgatgtttcccccaccgatgcaagcaactcatcgtcagatgatgacttt ccagctttagaaatgaggaagattaatgtaggtctcgacttgaagttcaacaagaaaaac ctcgaagttcgtggctacacgtccaagcgagacggtgcttggttttattcagggaaagcc gttcaactcgttaatgaatttgtgatggaattttctgactttataagttttttaagtcga gttgaaaagggacgagatgtatttgatgctggagaatttttccctgataaaccattagaa agaataaatgagatggtagaatggctggaagaaaaaggagttcgagatttaccaagaatt ccaaccaacaccaaattacttgatgatgaagacattgactctgtttggaagtatatcttg aaacataagagcccatctaaaaagacaactataaaaaaatggaccgtccagccgaatttt ctattaaagcctggactcgatcgaggttgtgttccaccaattcctcattgttcttatacc atattggaccgagtgatttgtgttgaccgaggagcgcctattcctgtgggccggcgtggg accattgttggaattcaaactccacaagcttctgaaccggaacaaattgaagaatctttc aagtctactggagcagccacactaatgacattaatcattctttgcgatccagccgcggat gtttttgataacccagaaaatgttgagctcagcaacagcgaacggaaagaattaagtgga accctagcatcactattacggataactgatcctggtcaagaaacagttggttttgagatg cccaaagctagtaaaagaagtgtatcttcagatttgaaaccccgtttaataaaactttat ccataccaactccttaacctcacagaaggcccagttactctgcgtcaaagccacaaggat tcaaaacaattgcagactatcactggctttcatatgaatggacatgtaaagcagccccaa aagttgcaagaattgacacaaaacagaattgttcctctaatgtctcaatcagtgggaact attcagtcacggtcttcggctccaggccagtcttcctctgcaaaaaacaataaggacttt gtcccattcgaaagcaaacgagtccaagcttctaaacaaaagcaacaactggcacctgta ccccaggattacactaataaaccatctaaaccagagcaactcaacaaggctcaaatacag ataatgggtagagtgagtaacaatggaaccttagacaaaacagctaaggctttgccctgg ccaccacaacctctggtaaaagttgaagtgccgattaacgaatcgttctctgtagccgct tttcttcagcaacaatttaatgctgcgccaataaataagcaaaaagaagttcataataaa caacagccccctcctgcccatcctccagttgaaacagcaataaaagaaccacctctgcca gaatacatgcatgccgttcctaaaccactgatgccagccattaatgtccgtccgaaacaa gtcaatcaatcgaatccgccaaagggatgttcagagattttttctgcagcaacagcttat cacccaccttctgtacatcctgaatcaattcccgtggtacagcctacagcagcacacgga agtcaggaacctaatcaaattttggaaatgttgaacaaggctacaacccgtcactataat tctaaaaagcctcgatctcagcagcaacagcaaagtaggaaaggaaaaggaccaggtcct tcagctccgcccgtcaacttgccattttcagcatgtcgaccacccgtcccaagtcccccc tcaaattggactcaacatagatatgctgctccaatcgtacctacaaattccacgaatcat cctcagagggaacaaagacaacacaactttcattctagacaatttgtttctcaaaggttc tttgtgccactgcaagtgtctcggaatgcttctactgcttctagtaaacgccaacctaac cctcgtatcccacaaaccccgtccaataatagagctgaacaattgccggagaaacaatta gcaggagattctatttcgcaacctggatcaagtagtaaaacatcgacagaaacggtgagt aaaaaggaacccgtactaaagctggcaccagttgaaccccaggagtctgctccgaccaca tcatctgccgaaacatcgaaaccacaaggtcgaaaatctcgtttggcagccaactttgga aataattgttaa

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