Folsomia candida: 110842380
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Entry
110842380 CDS
T05043
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
fcd
Folsomia candida
Pathway
fcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110842380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcd03021
]
110842380
03041 Spliceosome [BR:
fcd03041
]
110842380
03036 Chromosome and associated proteins [BR:
fcd03036
]
110842380
Transcription machinery [BR:
fcd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110842380
Spliceosome [BR:
fcd03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110842380
Complex B
110842380
Complex C
U2 SnRNP specific factors
110842380
Chromosome and associated proteins [BR:
fcd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
110842380
TFTC complex
110842380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
110842380
NCBI-ProteinID:
XP_021943806
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MFLYNLTLQRSTGITHAIHGNFSGSKLQEIIVSRGKLLEILRPDPNTGKVVTLLSVDVFG
VIRSLMGFRLTGGSKDYIVLGSDSGRIVILEYNPIKNAFDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGSVEKQKLVYILNRDAQARLTISSPLEAHKSNTFVYHIVGVDVGFENP
MFACLEMDYEEADIDSTGEAAQNTKQTLTFYELDLGLNHVVRKYSEPLDEHANFLITVPG
GNDGPSGVLICSENYITYKNLGDQPDIRCPIPRRRNDLDDPERGMIFVCSASHKTKSMFF
FLVQTEQGDIFKITLEIDDDMVTEIKLKYFDTTPVATSMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRHLRNLVLVDEMDSLSPIVTCQVADLANEDT
PQLYMLCGRGPRSTMRVLRHGLEVTEMAVSELPGNPNAVWTVKRRSDDDFDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQIYPDGIRHIRADKRVNEWKAPG
KRTIFRCAVNARQVVIALTGGELVYFEMDPTGQLNEYTERREMPADVVSMALGSVPVGEQ
RSRFLAVGLADSTVRIISLDPSDCLSPLSMQALPTLPESLCIVEMGATEDGQHGTLYLNI
GLDNGVLLRTVLDPVTGDLADTRTRYLGSRPVKLFRIRMQGGEAVLAMSSRSWLSYNFQN
RFHLTPLSYESLEYAAGFSSEQCPEGVVAISTNTLRILAMEKLGAVFNQMSFPLEYTPKK
LSIQPETGHLVILETDHNAYTDNIKKQRRVQMAEEMKEAAGPDEQELAQEMADAFLNEDL
PENMFSAPKAGPGMWAALLRIMDPIEGKSLFVHRFEQNDAAISLAYCKFNAQGEFSHFVV
VGVTKDLQLSPRSAGASFLYTFRMSAEGTELEFLHKTSIEDIPVVLHPFQGKLLVGMGKT
LRMYDYGKKKLLRKCENKNFPTTIVHMSSIGTRVFVGDIQESVHYVKYKRQDNQLVIFAD
ETNPRWITATAVLDYNSAAVADKFGNIGVLRLPNNTDDDVDEDPSGTKALWDRGLLSGAS
NKLEVYNNFHVGETILSLQKSTLIPGGNESLVYTTLSGSVGIIVPFTSREDHEFFRDLEM
HMRSENSPLCGRDHLSYRSYYFPVRNVIDGDLCEQYNSIDPSKQKSIAEELDRTPNEVAK
KLEDIRTRYAF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctataacttgacattgcagcggtccactggaataacccatgccattcatgga
aatttcagtggttccaaacttcaggagattatagtttctcgggggaagctgctggaaatc
ttgcggccagacccaaacactggcaaagttgttacgctccttagcgtagacgtatttggc
gtaattagatctctaatgggattcagattaacgggtggttcgaaagattacattgtactg
ggctcggactctggtcgtattgtaatattagagtacaatccaataaaaaatgcgtttgat
aaagttcaccaagaaacttttgggaaaagtgggtgccgtcgcattgttcctggacagtat
ttagctatcgatcctaagggcagggcggttatgattgggtcagttgaaaaacagaaattg
gtttacattttaaatcgagatgcacaagcacgtctgacaatttcttctccactagaagcc
cataaaagtaacacgtttgtctaccatattgtgggcgtagatgtgggattcgagaatcca
atgtttgcctgtcttgaaatggattatgaggaagctgacattgattcaacgggcgaagct
gctcaaaatacgaagcagacgctcacgttttacgagttagatttggggcttaaccatgtt
gtgagaaaatacagtgaaccacttgacgagcatgcaaacttccttataactgtgcctgga
ggaaatgatggtccaagcggagttctaatttgctctgaaaactacatcacttacaagaat
ttaggagatcaacctgatattcgatgtcccatccctagacgaaggaatgatttggacgat
ccagaacgaggaatgatatttgtgtgttccgcctctcataaaacaaaaagcatgttcttc
ttccttgttcaaacagaacaaggggacatcttcaaaataacattggagatcgacgatgat
atggtgaccgaaatcaagctgaaatatttcgacacaactcctgtcgcaacctccatgtgt
gtactaaaaaccggcttcttattcgtcgcatctgaatttggcaaccactatttgtatcaa
attgctcatttgggcgatgatgacgacgagcccgagttcagctctgccatgccattagaa
gaaggagatacatttttctttgctccccgacatttaaggaatctcgtacttgttgatgaa
atggactcgctgtcaccgatcgtaacttgtcaggttgctgatttagctaatgaggacacg
ccacagctgtacatgttatgcggccgaggtccaagatcaacaatgagggtgttgagacac
gggctcgaagtaactgaaatggctgtttctgaacttcctggtaatccaaatgctgtatgg
acagttaaacgacgatctgatgatgactttgattcgtacattattgtatcattcgtcaac
gctacgttggtcctttccattggtgaaactgtggaggaagttacggattctgggtttctt
gggactactccaacattatcatgctctgctttaggagaagacgcactagttcagatttac
cctgatggaatacgtcatatcagggcagacaagagggttaacgaatggaaggcaccagga
aaacgcaccatttttcgctgtgctgttaatgccagacaagtagttattgctcttaccgga
ggagaacttgtatactttgaaatggacccgactggtcaactcaatgaatacaccgaaaga
cgcgaaatgcctgccgatgttgtttcaatggcactagggtcagttcctgttggagagcaa
aggtcacgattcttagctgttggattagcagatagcacagtcagaataatttcattagat
ccatccgattgtctaagtcctttgagtatgcaagctttgcccactctacccgaatcgctt
tgtatcgttgaaatgggtgcaacggaagacgggcaacacggtactctgtatctgaatatt
ggtctcgataatggagttctactcaggactgtccttgatcctgtcactggcgacctagca
gatacccgcactagatatttgggatctcgcccagtaaaactatttagaattcgtatgcaa
ggtggcgaagctgtgttggcaatgtccagtcgttcctggttgagctacaattttcagaac
agattccatctaacaccactgtcctacgaaagcttagaatatgcagcaggattttcttca
gaacagtgcccagaaggagttgttgcgatttcaaccaacacactcagaattctggccatg
gaaaaattgggagccgttttcaaccagatgtcattccctcttgaatatactcccaaaaaa
ctttcaattcaaccagaaactgggcaccttgtgattctcgagacagatcacaatgcatac
acagacaacatcaagaaacaacgtcgagttcaaatggcagaagaaatgaaagaagccgca
ggcccggatgaacaggagttggcacaggaaatggctgatgcatttctcaatgaagatctc
ccagaaaacatgttttcggctcccaaagctggtccaggaatgtgggcagcattgctgaga
attatggaccccattgaaggaaaatccctatttgtacatcgattcgagcagaacgatgcg
gcaattagtttagcatattgcaaatttaatgcacaaggggaattcagtcatttcgttgtg
gttggagtcacaaaagatctccaactctctcccagatcagcaggtgcaagttttctatat
acgtttaggatgagtgcggaaggtacagaattggaatttttgcacaaaacctctattgaa
gacatcccagttgttcttcatccattccaaggcaaattgctggttggaatgggaaaaacc
ttacgaatgtacgattatggcaaaaagaaactgctaagaaagtgtgaaaataagaatttt
ccaaccaccattgttcacatgtcttcaataggaaccagagtttttgtcggcgatatccaa
gaaagtgtccattacgtaaaatacaaacgacaagataatcaattggttatttttgcagat
gaaactaatcctagatggataactgcgacagctgtattagactacaattccgctgcagtc
gcagataagtttgggaatattggggtgcttcggctaccaaataatacagatgacgatgtt
gatgaagatccatctggcaccaaagcattgtgggatcgtggtctattgagcggagcgtca
aataaacttgaagtatacaacaatttccatgttggagagactatcttatcactacagaaa
tcaactctcatccctggtggaaacgagtcactcgtatacacgactctctcagggagtgtt
ggaataattgttccttttacgtctagagaagatcatgaattctttagagatttagaaatg
catatgcgtagtgaaaattcccctttgtgtggcagggaccatttatcctatcgatcgtat
tattttccagtcagaaatgtcattgacggagatttgtgtgagcaatataactctatagac
ccaagcaaacaaaaaagcatcgcagaggagctagaccgaacaccgaatgaggttgccaaa
aaattggaggatattcgaactcgttatgcattttaa
DBGET
integrated database retrieval system
