Folsomia candida: 110842429
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Entry
110842429 CDS
T05043
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
fcd
Folsomia candida
Pathway
fcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110842429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcd03041
]
110842429
Spliceosome [BR:
fcd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110842429
Complex C
U5 SnRNP specific factors
110842429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
110842429
NCBI-ProteinID:
XP_021943865
LinkDB
All DBs
Position
Unknown
AA seq
2368 aa
AA seq
DB search
MALPPFMVPLGMPPPHPWMIPTQQIPPPQQMMPPPPGYNLGEMPPGSSSYNEYDDGRAQL
TDEQKHEKALKWQQIQMKRYEEKRKFGFVDPMKEDMPPEHVRKIIRDHGDMSSRKYRHDK
RVYLGALKYMPHAVLKLLENMPMPWEQIRDVSVLYHITGAITFVNEIPWVIEPVYIAQWG
SMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQMDMDSDEDSAVLD
WFYDHNPLSDSKLVNGPSYRTWHLTLPIMATLYRLANQLLTDLVDANYFYLFDLKSFFTA
KALNMAIPGGPKFEPLIKDASQLDEDWNEFNDINKIIIRQPIRTEYRIAFPFLYNNMPNF
VHLSWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRHAVKSMVEDFDENDEFELDFVEPF
LNHLPLYNDHTANGIALLWAPRPFNMRSGRTRRAVDIPLVKTWYKEHCPPSQPVKVRVSY
QKLLKYYVLNALKHRPPKPQKKRYLFRSFKATKFFQCTKLDWVEAGLQVCRQGYNMLNLL
IHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLMKLIVDSHVQYRLN
NVDAFQLADGMQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGC
GFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRA
SVMHDIVDMMPEGIKANKAKTILQHLSEAWRCWKANIPWKVPGLPTPVENMILRFVKMKS
DWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKSEQERQHNYLKDGPYISPEEAI
AIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQNQREELGLI
EQAYDNPHEALSRIKRHLLTQRAFKETGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLW
YEADKRRLFPHWVKPADSEPPPLLLYKFCQGINNLQDIWDTSEGECNVLLESSYEKIYEK
MDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLV
LDLLVLGLQRASEMSGPPQSPNDFTTYQDCATETAHPIRLYTRYIDRVHILFRFSADESR
DLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTT
VEWENSFVSAYSKDNPNLLFNMCGFECRILPKCRTTHEEFTHRDGVWNLQNDITKERTAQ
CFLRVDDESMSRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDL
LVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTD
VGITHFRSGMSHDEDQLIPNLYRYIQPWEAEFIDSQRVWAEYALKRQDANAQNRRLTLED
LEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKAYQVLKQNPFWWTHQRHDGKLWNL
NNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLN
QIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHE
SVIMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNVSRPSLLAD
SKDTMDSTTTQKYWLDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLISIDL
AYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQN
YGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVW
AGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGS
ELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKSISSYTAFSRLILILRALHVNN
ERTKVILKPDKTTITESHHIWPTLSDDEWIKVEVQLKDLILADYGKKNNVNVASLTQSEI
RDILLGMEISAPSQQRQQIAEIEKQSKEQSQLTATTTRTVNKHGDEIITSTTSNYETQTF
SSRTEWRVRAISATNLHLRTNHIYVSSDDIKETGFTYILPKNLLRKFVIISDLRAQIAGY
MYGVSPPDNPQVKEIRCVVMPPQWGTHQTVHLPTLLPNHELLKTLEPLGWIHTQPNELPQ
LSPQDITCHARIMAENPEWDGEKTVIITCSFTPGSCSLTAYKLTPSGYDWGRQNTDRGNN
PKGYLPSHYEKVQMLLSDRFLGYFMVPAQGSWNYNFMGVRHDPNMKYDIVLSNPKEFYHE
VHRPAHYLNFSSIENAEAFIADREDLLA
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaccaccgttcatggtcccactcgggatgcctcccccacacccctggatgatt
cccacacagcaaatccctccccctcagcagatgatgcccccaccccctggctacaattta
ggcgaaatgccacccggctccagctcttacaatgagtatgacgatggaagagcgcaactc
accgatgaacagaaacacgagaaggccctcaaatggcaacagatccagatgaagaggtac
gaggagaagagaaagtttggtttcgtggaccccatgaaggaggacatgccgccggaacat
gttcgcaaaattattcgcgatcatggagacatgagctcgagaaagtaccgtcacgacaag
cgggtctaccttggagcgttgaaatacatgccacacgcggttttaaaactattggagaac
atgcccatgccgtgggagcagattcgagacgtcagcgtcctgtaccacatcacgggagcg
attacgttcgtgaatgagattccttgggtcatcgaaccagtctatattgctcagtgggga
tcgatgtggatcatgatgcggagagagaaacgagaccgtcgtcacttcaagaggatgcgt
ttccctccctttgacgacgaggagcctcctctcgactatgctgacaacgtactggacgtc
gagcccctcgaagccatccagatggacatggattctgacgaggacagcgcagttctggac
tggttctacgaccacaatcccctctcagactcgaaactggtgaatggcccgtcctaccga
acgtggcacttgaccctgccaatcatggcgaccctctaccgtctcgccaaccagctgctg
accgatctagtcgacgccaattacttttacttgtttgacttaaagtccttcttcacagcg
aaagcattgaacatggcgatccctggagggcccaagtttgaacctttgattaaagatgcg
agccagttagatgaggactggaacgaatttaacgacattaacaagatcattatccgccaa
ccgatccgtactgagtatcgaatcgcgttcccctttctgtacaataacatgcccaacttt
gtgcatctctcgtggtatcacacgcccaacgtggtcttcatcaagacggaagatccagac
ttgccagccttttactttgatccattgatcaacccaatttctcatcgacatgcagtgaag
tcaatggtggaggattttgatgaaaatgacgagttcgagttggactttgtcgagccattc
ttgaaccatttgcccctttacaatgaccacacggcgaacgggattgcgctcctctgggct
ccgcgtcccttcaatatgagatccggtcggactcggcgagcggtggatattccgctcgtg
aagacgtggtacaaggaacattgtccaccgagtcagcctgtcaaagttcgcgtctcatac
cagaagctcttgaagtactacgttcttaacgcgttgaaacatcgaccaccaaaaccgcag
aaaaagagatacttgttcaggtcatttaaggctacaaagtttttccagtgtacgaaactc
gactgggtagaggcagggttgcaggtgtgccgtcaagggtataatatgttgaatctcctc
atccatcgcaaaaatctgaactatctccacttggattacaacttcaatctgaagcccgtg
aaaacattgacgacgaaggagcgaaaaaaatccaggttcggaaacgctttccatttgtgt
cgagaaatccttcgattgatgaagcttatcgtcgactcacacgttcaatatcgtcttaac
aacgtggacgcgtttcaactcgcggatgggatgcaatatattttcgcccacgtgggacaa
ctcacggggatgtaccgctacaagtacaagctgatgagacagatcaggatgtgcaaggat
ttaaagcatctcatctactacagattcaacaccggtccagttgggaaggggccaggttgt
ggtttctgggctcctggctggcgagtttggctcttcttcatgcgaggaatcactccatta
ttggaaagatggttgggcaatttgctttctcgtcaatttgagggacgtcattctaaggga
gttgcaaagactgttacgaagcagagggtcgagagtcatttcgatcttgagttgagagca
tccgtaatgcacgacattgtcgacatgatgccagaagggatcaaggccaacaaggcgaaa
acgattcttcagcacttatcggaagcctggcgctgttggaaggccaacattccttggaaa
gtacccggactgccgaccccagttgaaaatatgattctgcgattcgtcaaaatgaaatcc
gattggtggacgaacacagctcattacaacagagagcgaatccgtcgtggtgccacggtc
gacaagaccgtgtgtaagaagaatctgggtcgtttgactcggctttacctcaagtcggag
caggagcggcaacacaactatttgaaggacgggccgtatatttctcctgaggaggcgatc
gctatctacacaacgaccgtgcattggctcgagtctcggcgattttccccaattcccttc
cctcccttgtcgtacaagcatgacaccaagttgctaatcttggcattggagaggctcaag
gaagcttacagcgtcaagtctcgcctgaaccagaaccagcgagaagagctcggcctgata
gaacaagcgtacgataatccacacgaagccttgtctcgaatcaagcgtcacttgctcacc
cagcgagccttcaaagagacagggattgaattcatggacctgtactcccacctgatcccc
gtctatgatgtggaacctctggaaaagataacagacgcctatctagaccagtatttgtgg
tatgaggccgacaagcggcgcctgtttccacactgggtcaaacccgctgactctgaacca
ccacctcttctcctctacaagttctgtcaggggatcaacaatctgcaagatatttgggac
acgagcgaaggagagtgcaacgtcctcctggaatcctcttatgaaaagatttacgaaaag
atggacttgaccctgctcaatcggctcctccgcctcatcgtggatcataacattgctgat
tacatgacggccaagaacaacgttgtcatcaattacaaggacatgaaccataccaacagt
tacgggatcatccgaggattgcagttcgcttccttcattgttcagtattacgggctggtc
ctcgatctgctcgttctgggtttgcagcgagcctctgaaatgtccggccctccacagagt
ccgaatgactttacgacgtatcaggactgtgcgacggagacggcacatcctattcgactc
tacacccgctacattgacagggtccacattcttttccgcttcagtgcggacgagtctcga
gatcttatccagcgttacttgacggaacatcccgaccccaacaatgagaacattgtagga
tataacaacaaaaagtgttggcctcgcgacgccaggatgcggctgatgaaacatgacgtg
aatctgggtcgtgccgtcttctgggatattaagaatcgactgcccagatctgtgaccacg
gtcgagtgggagaacagcttcgtcagcgcatattccaaggataatcccaacttgctcttt
aacatgtgcggtttcgagtgcagaattctccctaaatgtcgcaccacgcatgaagaattt
acccatcgcgatggcgtgtggaatcttcagaacgacattaccaaggagcgaacagcccag
tgcttccttcgtgtggatgacgaatccatgtcccgattccacaaccgggtccgtcaaatc
ctcatggcatccggctccacgaccttcaccaagatcgtgaacaagtggaatactgccctc
atcggtttaatgacctatttccgcgaggctgtcgtaaacacacaagaattgcttgatctg
ctggtcaagtgtgagaataagattcagactcgaatcaagatcgggctcaactctaaaatg
ccgtcccgtttcccacccgtcgttttctatacaccaaaggagttgggagggctgggcatg
ttgtcgatgggtcacgtcctcattccacagtccgatctaaggtggagcaagcagacggac
gtggggattactcatttcagatcaggcatgagccacgatgaggatcaactgattcccaat
ttgtacagatacattcaaccttgggaggctgagtttattgactctcaacgcgtctgggcc
gagtatgctcttaagcgtcaggacgcgaatgcacaaaaccgtcgcctgacccttgaagac
ttggaggactcttgggacagaggaatccctcggatcaacaccctcttccaaaaagatcgt
cacaccctcgcgtatgacaagggatggagagtgcggacagagtttaaggcctatcaagtc
ctgaagcagaatcccttctggtggacgcaccaacgtcacgatggaaaactctggaacttg
aacaactatcgtaccgacatgattcaagcgttgggcggggtggaaggtatcttggagcac
acactcttcaagggaacatacttccccacttgggagggtctcttttgggagaaggcatcc
ggtttcgaggagtcgatgaagtataagaagttgacgaatgcgcagaggtctgggttgaac
cagattcccaatcggcgctttactctgtggtggtcgcccacgatcaacagggcgaacgtg
tacgtaggtttccaggtgcagctggatctcacaggaattttcatgcacgggaagattccc
accttgaagatctcgctcatccagattttccgcgctcacttgtggcagaagattcacgag
tctgttatcatggacttgtgccaggttttcgatcaagaattggacgcactggagatcgag
accgtccaaaaggaaacgatccatccccgaaaatcatacaagatgaattcctcctgtgcc
gacattctgctctttgccgcctacaagtggaacgtgtcgcgcccctcactccttgctgac
tctaaggataccatggactccactacgacgcaaaagtactggctggacgttcaacttcgt
tggggtgattatgattctcatgatattgagcgatacgcgagagccaagtttttggactac
acgacggataacatgtccatctacccatctccgaccggagtgctgatatctatcgattta
gcatataacttgcatagcgcgtacggaaattggttccctggatgtaagccacttattcag
caagcaatggctaaaattatgaaggccaacccggccctctacgtacttcgggaaagaatc
cgaaaggcgctccaactttactcttctgagccgacggaaccctacctctcctcccaaaat
tatggagagctcttctccaaccagatcatctggttcgtcgacgacacaaacgtctaccga
gttacgattcataaaacgttcgaagggaacttgaccacgaagccgatcaacggtgcaatc
ttcattttcaatccacgcacaggtcaactcttcttgaagataatccatacttccgtctgg
gctggacagaagcgtttgggacaactcgccaagtggaaaacagcagaagaagtggctgcc
cttattcgctccctgcccgtagaagaacagccgaagcagatcattgtaacacgaaaagga
atgttggatccactcgaggttcacttgctcgatttccccaacattgtgatcaaagggtcc
gaacttcaactcccattccaggcttgtctcaaagtagaaaagtttggtgatcttattttg
aaagcgactgaaccacaaatggtcctcttcaacttgtatgacgactggttaaagtcgatc
tcttcttacaccgcgttttcaagattaattctcatcttgcgagccctccacgtcaacaat
gaacggacgaaggtgattctaaaaccggacaagactacgatcacagagtctcaccacatt
tggcccacgctctcggatgacgaatggataaaggttgaagttcaactaaaggatttgatc
ttggcagattacgggaagaagaacaatgtcaacgtggcatcgttgacgcagtctgaaatt
cgagatattttgcttggtatggaaatctcggcgccttcccaacagcgccagcagattgcg
gaaattgagaaacagagcaaggagcaatcccaattaacagcaacaacgacacggaccgtt
aacaagcacggtgatgagatcattacgagcacgacgtcgaattatgagacccagacattt
tcttcgcgaaccgagtggagggtgagggccatttccgcgacgaatctacatctgcgaacg
aaccatatttacgtgtcatccgatgacattaaagaaactggctttacttacatcctaccc
aaaaatttgttgaggaagtttgtgataatttcggacttgagggcgcagattgccggttat
atgtatggcgtgagtccaccggataacccgcaagtgaaggagattcgatgcgtcgttatg
ccgccacaatggggaacgcatcaaacggtgcatttgcctacactgctcccgaaccatgag
ctacttaagaccttggaaccactgggatggattcacacccagccaaacgagctgccccaa
ctgtcaccacaggacatcacttgtcatgctagaatcatggcggagaacccagaatgggat
ggcgagaaaacggtcatcatcacgtgcagcttcactcccgggtcttgttctttgactgcg
tataaattaactccaagcggttacgactggggtcgccagaacactgaccgtggcaacaac
cccaaaggatatctgccctctcactacgagaaagtccaaatgttgttgagtgaccggttc
ttgggctatttcatggttcctgctcaagggtcttggaactataacttcatgggcgtacgt
catgaccccaacatgaagtacgacatagtgctgtccaacccgaaagaattttatcacgaa
gtccatcgacccgctcactaccttaatttctcttccattgagaatgccgaggctttcatt
gccgatcgggaggatttgttggcgtaa
DBGET
integrated database retrieval system
