KEGG   Folsomia candida: 110844284
Entry
110844284         CDS       T05043                                 
Name
(RefSeq) negative elongation factor B-like
  KO
K15180  negative elongation factor B
Organism
fcd  Folsomia candida
Pathway
fcd03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:fcd00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110844284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fcd03021]
    110844284
Transcription machinery [BR:fcd03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     110844284
SSDB
Motif
Pfam: COBRA1 RNA_pol_Rpb1_1 DUF6866_C
Other DBs
NCBI-GeneID: 110844284
NCBI-ProteinID: XP_021946145
LinkDB
Position
Unknown
AA seq 570 aa
MSTGTGFGLEEIGIPGRDYLREALTNCSDPLKAIEEFQSENEILLPSLRPMLPLLDLHGT
SRLDFHVAVMEELRDTLIKKINEIGTKWEPKEKDKKLKELLSKSFPVIKIKPLRPVVLSI
LKNMTTINDKYLDVILNDKDLYEQCDTEVKRQIWKDNQTLYGDQVTPLFTQYTKEKEQCL
FSYENKVNLFFTHSPKIRRQGEVVKKLTHMIGNNVKLYDMVLQFLRTLFVRTKNVHYCSL
RAELLMALHDAEVQEVMSVDPCHKFTWCMDACIREKNMDAKRSRELQGFLDSIKKGEDKL
LGDLSVILCDPFAIHFLATTSMKVMQTIMINESYPRENHVLILLLRMLSLGLSAIDILTT
QHFKEPKFDSQIVTKFLPALLSLMVDDQVRNLNAKLPPDERESAIAIIEHSGPPPDAFQA
YVNDSGVAATLAMYYTLQLARQKDKVGLMRVLGCLSTSYRSHSYDDPYLHSLISLLIGIE
DEFAAEDFCTVVFDEFLCPGLPQENVTKHLLRLVYNVCHKLGTTRMETVLKTLQPSSMQT
ESLRVAFSALEEKINAIEQATTNKPPTSPH
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgtcgacgggaaccgggtttggtttggaggagatcgggatacctggacgagattatctt
cgtgaagccctgactaattgttccgacccactcaaagcaatcgaggaatttcagtctgaa
aatgaaattctactgccgtcccttcgacccatgctccctttgctagatttacatggaaca
tcaaggctggactttcatgtagccgtcatggaggaattgagagacaccttgataaagaag
attaatgaaattggtacgaaatgggagccgaaggagaaggacaaaaaattgaaggaactt
ttgagtaaaagctttccagtcatcaaaattaaaccactacgaccagtggttctatcaatt
ttaaagaacatgaccacaattaacgacaaatatttagacgttattctcaacgataaagat
ttatatgagcaatgcgacacagaggtaaagagacagatttggaaggataaccaaacgttg
tacggggatcaagtcactcctctatttacacaatacacaaaggagaaagagcaatgttta
ttcagttatgagaacaaagtcaatttgttttttactcattccccaaagattcgaagacaa
ggtgaagttgtaaagaagttgacgcacatgattggtaacaatgtcaaattatatgacatg
gttctacaatttttgagaacactattcgtacgtacaaagaatgttcattattgttctctc
cgtgcggaactactcatggcacttcacgatgctgaagttcaagaggttatgtctgttgac
ccgtgccacaaatttacgtggtgtatggacgcttgtatcagggagaagaatatggatgcc
aaacgttccagggaattgcagggttttctagatagcatcaaaaagggagaagataagctt
cttggagatctgtctgtaattctttgtgatccatttgccatccactttttggcaacgact
tcaatgaaagttatgcagaccattatgatcaatgaaagttatcccagagaaaaccatgtt
ttaatcctattgcttcgtatgctgtcattgggactaagcgccattgacatcttgactact
cagcactttaaggagcccaaatttgattctcaaatagtcaccaaatttcttcctgcactg
ttgtcgcttatggtggatgatcaagtcagaaacttgaatgccaaactacctcctgacgag
cgtgaatccgccatcgcaattattgaacattcggggcctccaccggatgcattccaggcg
tatgtcaatgattctggagttgcggctactttggccatgtactacaccttacaactagct
cgtcaaaaggataaggtcggtttgatgcgggtattgggttgcttatccacttcgtataga
agtcattcgtatgacgatccttatctacattcactgatttctctactaatcggaatcgaa
gatgagtttgctgctgaagatttctgtacagttgtttttgacgaatttttatgtcctgga
cttccacaagaaaatgtgacgaaacatctccttcgactggtctacaacgtgtgtcataaa
ctggggacaactcgaatggaaaccgttctgaaaacattgcagccttcatctatgcaaact
gaatcccttcgcgtcgcattttcagcgcttgaagaaaaaattaatgctatcgaacaagct
actaccaataaacccccaacttctccacattaa

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