Folsomia candida: 110845476
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Entry
110845476 CDS
T05043
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
fcd
Folsomia candida
Pathway
fcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110845476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcd03041
]
110845476
Enzymes [BR:
fcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110845476
Spliceosome [BR:
fcd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110845476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
PWI
nSTAND3
AAA_30
nSTAND_NTPase5
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
110845476
NCBI-ProteinID:
XP_021947600
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MTEQWVNDKLHDILGMSDRTVAEFLIGLAKKSSSEDGLINAMKQTGVINVDPSTIGFARE
LYQKVPHAASKVNQARIIEQNAVAQQRKNLAYRLVSSDDDEPRPLSAVQQQMGSKVNKRS
KQEHIRQRRGKRSDSDDDDDTVVLRRTQTSSKRVKIEEPEEEDEFDKMERERNEDIKGRD
EFAKRLKEKDETKTRSIVAKSDKKALAEAAFRLKHEATKREEIVPELRTKSRYKYLEKRK
EDKMLELELDIADEGRLWQEDELTEREKQEIAYKKRILNLAKEHESARDIIKVQRYMMPE
ERRGKEDFQYEETDEREKIPNSEQKKWEDEQMGFAQYKFGAKDAKNKKPKKEYDIILDEQ
IEFIQALKMPGNQKEKEMELTETEKKRMTIEETQKSLPIYPFKESFIDAVRGHQVLIIQG
ETGSGKTTQIPQYLKDAGFCDDGMKVGCTQPRRVAAMSVAARVAEELSTKLGNEVGYSIR
FEDCTSERTIIKYMTDGMLLREFLGEPDLKSYSAMIIDEAHERTLHTDVLFGLIKDIARF
RPDLKVLISSATLDAEKFSNFFDDAPIFRIPGRRYPVDIYYTKAPEADYIDACVVTILQI
HVTQPLGDVLVFLTGQEEIEACQELLTERCRRLGNQVKELIILPIYANLPSDMQAKIFEP
TPPGSRKVILATNIAETSLTIDNIIYVIDPGFCKENSYNARTGMESLIVVPISKASADQR
AGRAGRVAAGKCFRLYTAWAYKHELEDTQRPEIQRVNLGNVVLLLKSLGINDLIHFDFLD
PPPHETLVLALEQLYALGALNHKGELTKLGRRMAEFPVDPMMAKMILASEKYKCSEEILS
ISAMLSINNAIFYRPKDKIIHADKARKDFFLPGGDHLTLLNIYNQWHQTGFSDQWCFENF
IQHRSMKRARDVREQLEGLMQRVEIELISNPSETQNIRKAITAGYFYHTVRLSDHGQYKT
VKHNQTVMIHPNSSLFEQQPPPRWIIYHELVFTTKEFMRQVIEIENSWLLEVAPHYYKAK
DLEDSKMKKMPKVMGKAKDDLSR
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacaatgggtcaacgacaagcttcacgatatcctggggatgagcgaccggacg
gtggccgagtttttgattggtttagcaaaaaagagctcttctgaagacggtcttatcaac
gccatgaaacagaccggtgttattaacgtggatccaagtacgataggatttgcgagagag
ctgtaccaaaaggtcccacacgctgcatcgaaagtgaaccaggctagaattattgaacaa
aatgcggtagcacaacaacgaaaaaacttggcgtatcggttggtttcatctgatgacgat
gagccgaggcctttatctgcagttcaacaacagatgggatcgaaggttaacaaacgttcc
aagcaagagcacataagacaaaggaggggtaagcgctctgattccgatgacgatgatgat
accgtcgtactgcggaggactcaaactagcagtaaacgtgtcaaaatcgaagagccggaa
gaagaagatgaatttgataagatggaaagagaacgaaacgaagacatcaagggtcgagat
gaattcgcaaaacggttaaaggagaaagatgagacaaaaacaaggagcattgtagcaaag
tcggataaaaaggcattggcagaagcagcattccgactgaaacatgaagctacaaaaagg
gaagaaattgttccagaacttagaaccaagtctagatataagtacctagaaaagcgaaaa
gaagacaaaatgttggagcttgagctcgatattgctgacgaaggtcgattgtggcaagaa
gatgaattgacggaacgggaaaaacaagaaatagcctataaaaagagaattttgaacttg
gctaaggaacacgaaagcgcaagagacatcatcaaagttcaacggtacatgatgccagaa
gaacgaagaggtaaagaagattttcagtatgaagagacggacgagcgtgaaaagatcccc
aattccgagcagaaaaagtgggaggatgaacaaatgggatttgctcaatataagtttgga
gctaaagatgcaaagaacaagaagcccaaaaaagagtacgatataattttggatgagcaa
attgaatttatccaagctttaaagatgcccggaaaccagaaagagaaagagatggaactt
acagaaacagaaaagaaaagaatgacaattgaggaaacacaaaagagtttgccaatctac
ccattcaaggagtcttttattgacgcagtacgtggacatcaggtattgattatccagggg
gaaactggaagtgggaagacgactcaaattcctcaatacctcaaagatgccggattttgt
gatgatggtatgaaagtaggctgcacacaaccaagacgagtagctgcaatgagcgtggcg
gcacgtgttgctgaagaactatcgaccaaattaggaaatgaggttggatactcaattcga
tttgaagactgtacttctgaaagaactataatcaaatacatgactgatgggatgctgctt
cgagaatttcttggtgaacctgatttgaagtcctacagcgccatgattattgatgaagcc
catgaacgaaccctccacactgatgtactttttggactgattaaagatattgcacgtttc
agaccagatttaaaagtattaatatcttctgcaactcttgatgctgaaaagttttccaat
ttttttgatgatgctccaattttccgaattccaggaaggcgctaccctgtcgatatttac
tatactaaagcccctgaagctgattatattgatgcctgtgttgtgacgatacttcagata
catgtgacgcaaccacttggggacgttttagtatttcttactggtcaagaggaaattgaa
gcttgtcaggaattgctgacagaaagatgtaggagattggggaatcaagtaaaagaattg
attattttgcctatctatgctaatttgccatccgatatgcaagcaaagatatttgaacct
actccgccgggatcaagaaaagtcattttggcaaccaatattgcggaaacaagtttaact
attgataatatcatttacgtcatagatccaggtttctgtaaagaaaacagttataatgcc
cgaaccgggatggaatcattaattgtggttccaatatcaaaggcatctgcagatcaacgg
gccggaagagctggtcgagttgctgctggaaaatgttttagattgtacaccgcatgggct
tacaaacatgaactcgaagatactcaacgacctgaaatccaaagggtcaatttgggaaat
gtagtcttacttttaaaatcacttgggatcaacgaccttatccacttcgactttcttgat
ccacctccacatgaaactttggtattggcgttagaacagttgtatgcattgggtgcactt
aaccataaaggagagttgactaaactggggcgaagaatggctgaatttcctgtagatccc
atgatggcaaaaatgatattggcatcagaaaaatataaatgctccgaagaaattctttca
atatctgcaatgctgagcatcaacaatgccatcttctatcgacccaaagataaaattatc
catgcggataaagcgagaaaagacttttttcttcctggaggagatcaccttaccctttta
aatatttacaaccagtggcatcaaactggattttcggaccagtggtgttttgaaaatttt
attcaacacaggtccatgaagcgagccagagatgttcgcgagcaattagaagggctgatg
caacgggttgaaattgagttaatttccaatccatcggaaactcaaaatattagaaaggcc
atcactgcaggatacttttatcataccgtgagactaagcgatcatggacagtacaaaact
gtgaaacacaaccaaactgtgatgattcacccaaattctagcctttttgagcaacaacca
cctccaagatggataatttatcacgagcttgtctttacaacaaaagagtttatgaggcaa
gttattgaaatagaaaattcatggttgctggaagttgcgccacattactacaaagccaag
gaccttgaagattcgaaaatgaaaaagatgcctaaagtgatgggaaaggctaaagatgat
ttatcaagatag
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