Folsomia candida: 110845702
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Entry
110845702 CDS
T05043
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
fcd
Folsomia candida
Pathway
fcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110845702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110845702
03041 Spliceosome [BR:
fcd03041
]
110845702
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110845702
Spliceosome [BR:
fcd03041
]
Complex B
Other components
Prp19-related factors
110845702
Complex C
110845702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
PPR
Tcf25
Motif
Other DBs
NCBI-GeneID:
110845702
NCBI-ProteinID:
XP_021947866
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MEVSSVEKSESDVFVEALSDEDLAHEEEILRNPFSVKHWIRYITHLKTDKKNRKDPRRLY
LVYERSLKELPGSYKLWHAYLVFRKSHTLRKGPRDPSLQELYVTFERSLVFMNKMPRIWI
EYCDFAVKTGRVTQTRKIFDRALRSLPITQHHRIWPSYVNFVTKQHTIPETAIRIYKRYL
KLCPEHGEDFIEYLLSVGHLDEAAVRLANLVNDENFNSRKGKSNYMLWAELCDLISKNPK
EIKSLDVDAIIRSALRRYTDQIGSLWTSLADYYVRSGLFERARDIYEEGIRSVTTVRDFS
QIFDAYAQFEEVSLTKLMESDGFDDIVIEMRLARLENLMERRPILVNSVLLRQNPHNCNE
WLKRVDLLKEKPKEVIAAFTEGVQTVDPKQAVGKLNALWTSFAKFYEEADQLEDARVIFE
KGTQVNYLKVDDLAHVWCEWAEMELRHKNHNEALRLMYTATTPPTGVKVSYADETATVQA
RLYKSLKLWSFYADLEESFGTFKTCKAVYDRIIDLKIATPQIIMNYALFLEENQYFEESF
KSYEKGISLFKWPHVYDLWNTYLSKFLDRYGGEKIERARDLFEQCIDTVPPKYAKNFYLL
YAKLEEKHGSARRAMNIYEKSTKAVDKKDQYQMFNIYIQKAASLYGVTKTRPIFETAMET
LSDSDARQMGIRFAELETKLGEIDRARAIFAHTSQICDPRVSSDFWAAWKDFEVRHGNED
TIREMLRVKRSIQAMYNTQFTAHLIAQQTQLSAAAGVQSQASGESTTTSAMKEMEAAMEV
EKPLKRPDQVSFVRGDTLVQTHNAEKTVANPDEINLDEDEEDDDVADKGEENEDMEVEKA
HIPSAVFGSLKPVDRDADDENADADD
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttcgtccgtcgaaaaatcagagtcggatgtttttgtggaagcgctgagcgat
gaggacttggctcacgaggaggagattttaagaaacccattttctgtgaagcattggatt
cggtacatcacccatctcaagactgataaaaagaacaggaaggatccaagaagactttat
cttgtatatgagagatccttgaaggaacttcctggctcctataaattatggcatgcttac
cttgtgtttcgaaaaagtcacacgttaaggaaaggtcccagagacccttcattgcaggag
ttgtatgtgacgttcgaaagatcccttgtgttcatgaacaaaatgcccagaatctggatt
gagtactgcgattttgctgtgaaaactggccgtgttacgcagacaaggaagatctttgat
cgagctttgaggtcacttccaattactcagcatcacaggatatggccgagttacgtgaac
tttgtcacaaagcaacatacgattccagaaacagctattcgaatttataagcgatactta
aagctatgccctgagcacggcgaggactttatcgagtatttattatctgtcggtcatttg
gatgaagctgccgtgagattggcaaatcttgtgaatgatgaaaatttcaactcaagaaag
ggaaaatccaactatatgctttgggcagaactgtgtgatcttatttcaaaaaacccaaag
gaaataaaatctttggacgttgatgctattattcgtagtgcattaaggagatataccgat
caaattggatcactctggaccagtttagctgattattatgtcagatcaggattatttgaa
agggctcgcgacatttatgaagagggaattagaagtgttaccacagttcgagatttttct
caaatattcgacgcatatgctcaatttgaggaagtttctttgacaaagttgatggagtct
gatggatttgacgacattgtaatagagatgcgtctagcccgtttagaaaatctgatggaa
cgccgacccattcttgttaattccgttctacttcgccaaaacccgcacaactgtaatgaa
tggttgaaacgggtcgacttgttgaaggaaaagcccaaggaggtcatagcagcattcaca
gaaggcgtgcaaacggttgaccccaaacaagcagttggaaaactgaatgcattatggacc
tcatttgcaaagttctatgaggaggcagatcaattggaagatgccagagtaatattcgaa
aaaggaacgcaagtaaactacctgaaagtcgacgatttggcccacgtgtggtgcgagtgg
gcagaaatggaattgcgacacaaaaaccacaatgaagcacttcgtttaatgtacactgca
acaactccaccgactggagtaaaagtttcttatgccgatgaaactgctacggtacaagca
cgattatataagagtttgaagctctggtcattctatgcagacttggaagaatccttcggt
acattcaaaacatgcaaagcagtttacgaccgtattatagatctcaaaattgcaactcca
caaatcattatgaattatgccctatttttggaggaaaatcaatattttgaagaatctttc
aaatcctatgagaagggaattagtttgttcaaatggcctcatgtgtatgacctttggaac
acatacctttctaagtttttggatcggtacggaggagaaaaaatagagcgtgccagggat
ctgtttgaacagtgcatagacactgtacccccaaaatacgcaaagaatttctatttgcta
tatgccaaacttgaagaaaaacacggaagtgcacgtcgagcaatgaatatttatgaaaaa
tcaacaaaggcagtggacaagaaagatcagtatcagatgttcaacatttatattcaaaaa
gctgcctctttgtatggtgttacaaaaactcgtccaatttttgaaactgcaatggaaaca
ctgtctgattctgacgcaagacaaatgggaataagatttgcagaacttgaaactaaattg
ggagaaattgacagggctcgtgctatttttgctcacacttctcagatttgtgatccacgg
gtatcatcagatttctgggctgcgtggaaggattttgaagttcgtcacgggaatgaagat
acgattcgagaaatgcttcgtgtgaaacgatccattcaagcaatgtataatacccagttc
actgctcatctcattgcccagcaaactcagctttctgcagcagcaggagttcaatcccag
gcatcgggagaaagcactactacatcagcaatgaaggaaatggaggcagcaatggaagtt
gagaaacccttgaaaagaccagaccaagtttctttcgtacgaggtgataccctagttcaa
acacataatgcagaaaagactgtagccaacccggatgaaataaacttggatgaagacgaa
gaagatgatgatgtggctgacaaaggcgaagaaaatgaagatatggaggtggagaaagca
cacatcccatccgccgtctttggctctttaaaacctgtggatagggatgcagatgacgaa
aatgctgatgctgatgactag
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