Folsomia candida: 110845722
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Entry
110845722 CDS
T05043
Name
(RefSeq) uncharacterized protein LOC110845722
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
fcd
Folsomia candida
Pathway
fcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110845722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcd03041
]
110845722
Enzymes [BR:
fcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110845722
Spliceosome [BR:
fcd03041
]
Complex C
Other components
Step II factors
110845722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
RRM_1
AAA_22
HA2_N
Trimer_CC
HA2_C
Cas3-like_C_2
AAA_30
Helicase_RecD
IBR
IBR_1
Motif
Other DBs
NCBI-GeneID:
110845722
NCBI-ProteinID:
XP_021947896
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MENQIIKKHLEGMKALIDQILKMQSSEEFTVQDEKHVGSFKALQSKFNEMSEQYKAFKNL
KKKASTTLSESDYKKQMAREIYRLKGRLPAFAKRTEIDRHVDWFPESDWRVLIIQGQTGS
GKSTQIPQYLADHPSFAGKRIICTQPRKIAAVSLAKRVSIEYSNDPWAKPGQDIGYQIGG
AKVKESRVEFVTEGIMLERIMSNKPFTDVGCIIIDEAHERSIICDILLGSFKKADKRWKD
ILIVIMSATIDIEEFSTFFNNAPKVEMAGRTFPIEFFYHPLPDSATSEMSYIRREVVKKA
VDIHSRCGSVISGDILCFLPGQEDVLSAKEDFEREMTKINGRDNCKYFATKVYSLFGRQD
PEQQEEVFQKLGTNIRKIIFATDIAETSITIDGVVFVVDSGVRKEMIFDPKRNISTLKLT
TISKSSATQRAGRSGRTQPGECHRLYSEADFQSMSSSSAPEVFRKPLSLAVLSLIEMNIV
PMEFEWISSPSKDAMSAAEEELRYLGAIDEENKTTALGKLISKCQQEPKLVRMIYRGCQD
GFGMAAVTIASIFTVANMFYYIGADEAGKQESRKSRNTFALESGDVVTMFRVFQEYLSVS
GMNGDRKNDDDDNKREETEKVVNQRKQGGVWCRKNYINGKAIGLIMSTRKELVQLFRSTD
IWNSQLNQTNEPTDNELRRIIFAGYFLHTARLIRSRKSKLPQYFAVHPSVTGSLDFKSAL
VHHTTTKNTQTPEWIVYEKILRLKTTLLPTSTPIDFSWIGEESPAFLALCHAKQDELPTE
KIVISASQECLRNIFGRYFINLNSLEAELGCDLDVDIDNGILAAYCTAVKKPRVEANLKR
KVQIFMQVLKDQVEEEDYLGGTRVVVGLGYEVQEILFPQDFITIFIRSLDPSVSKTELKW
HLELHGISFRNLDLRSYETNQTAVIKFYSKADAKVALEVLKKEKFKGKELDVARAGMGPR
RGVTQEEVCRLKLSWSLAPSEGRAQICFHTAAEANNFVETVSTRFGGARVTALHGHVESK
NSKHQRNKPQPPAMVLRGIPDGACRYRFVVEEDLEPNEQQFDYRLTLGSLPLDIDEQELF
RRVKPTIPKWARVNRTVSTATKEKYEITISDEELKDKLAPFEEYISDGQCPQFYSDKNLG
RAILYVPVDNKLALQKASKIDYCSMKEDVYGQPHRLEIEYNHTTSVHTDLYKFIKDDIVQ
IKNMAYKKGAQVWDSADCNNKYGTKTTKSKFIFLKFRTCNPRLIGELQKSLESVSSYTKF
NHESLHLLLTTTGKLELDRIGKTAFLYLNPRNNGLYIYGRPEIQEKTKKQLLSSIKYFTT
LEVVDRPLMISKKKINLRRGKASAADVSKLERACKSSGVDYYDFVGNRILVSGSEKAFAK
LKNILEKDGLLYEKSPSHLAKLKGRPDCTICLMPPDSDFIQSSICPHAFCIDCLQPMFNI
MPPALPVKCQGEDCQKLLGIGDITKTAKKESLKKYLEVAVVKYQQEHSTLFLMCPKQDCG
QILCASDKIIGERGGEFYFCDECVTTYCIPCSLKAEKPCKSHEYDTCEEARSGLSNEVQI
HVRRIQEDILNLQCPRCKTAFYDFVGCVAVTCESCKCGFCGLCLTDCGNDAHAHARQCPK
NPKKNEYYASQVVIDRVHRELKVQKLQEYLKDIEINGAEPRVIESIRRAIRQDLIDLEIP
TF
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccaaattatcaagaagcatcttgaaggtatgaaagccttgattgatcaaatt
ttgaaaatgcaatcttctgaagagtttacagttcaagatgagaagcatgttggaagcttt
aaagcattacagtccaaatttaatgaaatgagcgaacaatataaagcttttaagaattta
aagaagaaagccagcacaactttgagcgaatctgattacaagaaacaaatggctagagaa
atctatagacttaaaggacgcctacctgcttttgctaaaaggactgaaattgatcgccac
gtcgactggtttcctgaatcagactggagagttctcatcattcaaggacaaactggtagt
gggaaaagtacacaaattccacagtatttggcagaccatccaagctttgcaggaaaacgg
atcatttgtactcaacctaggaaaattgcagccgtttctttagcaaaacgagtttcaatt
gaatattcaaacgatccatgggcaaaaccaggtcaagatatcggatatcaaattgggggt
gcaaaggttaaagagagtcgagtcgaatttgtaacggaaggtatcatgctggaaagaatt
atgtcaaacaaaccattcacagacgttggatgcattataatcgacgaagcccatgaacgc
agtataatttgtgatattctgcttggatcatttaaaaaagcggataaacgttggaaggat
atcctgattgtcatcatgtctgccacgattgatattgaagaattttcaactttctttaat
aatgctcccaaagtggagatggccggtcgaacatttccaatcgaattcttctatcatccg
cttccagatagtgcgacttcggaaatgtcttacattcggagggaggttgtaaaaaaggcc
gtggatattcactcacgttgtggatccgtgataagtggagatatcttgtgcttcctcccc
ggtcaggaggatgttttaagtgcgaaggaggactttgaaagggagatgacgaaaattaat
ggacgtgataattgcaaatatttcgccacgaaagtatattccctgtttggacggcaagat
ccggagcagcaggaggaagtatttcaaaaactggggacaaatatcaggaaaataatcttc
gcaaccgatatagctgaaacttctatcacgatcgatggagtggtatttgtggtagactct
ggagtcaggaaggaaatgatctttgaccccaaaaggaatatttctacgcttaagcttacg
acgatatcaaaaagttccgctacccaaagggcaggtcgttcaggcagaacacaacctggc
gaatgtcatcgtctgtattctgaagctgactttcaaagtatgagttcgtcatcagcccct
gaagtttttcggaagccattatcactcgctgtcctatccttaattgagatgaacattgtg
cccatggaatttgaatggataagttccccttccaaggatgcaatgtctgctgctgaagaa
gaattgcgttatttgggcgcgattgatgaagagaataagacaactgcactaggaaaatta
atttcaaaatgtcagcaagaaccaaaattagttcgaatgatttatcgtggctgccaagat
ggatttggcatggctgctgtgaccattgcttctatcttcaccgttgcaaacatgttttac
tacattggtgcagatgaagcggggaaacaagagtctagaaaatcaagaaatacatttgct
ctcgaaagtggagatgtcgttacaatgtttcgagtattccaagaatatttgagcgtgtca
ggaatgaacggggacaggaagaacgacgatgacgacaacaaaagagaagaaactgaaaag
gtagttaatcaaaggaaacaaggtggtgtctggtgtcgaaagaactacattaatggaaaa
gccattggcttgataatgtccacaaggaaggaacttgttcagttatttagatcgacagat
atttggaatagccaattaaatcaaacgaatgagccaacggacaatgaactgagacgtatc
atattcgcaggttactttcttcatactgctcgattaattcgttctcgcaaatcaaaattg
ccccaatattttgctgttcatccttcggtgactggaagcttggatttcaaatcagccctg
gtacaccacaccactaccaagaatacacaaactccagaatggatagtttatgaaaaaatc
ttgcgactaaaaaccacccttctcccaacttctacgcccatcgacttttcttggatcggt
gaagagagtccagcttttttagcgttgtgccatgcaaaacaagatgaacttcccactgag
aaaattgttatctcagcatcgcaggaatgtctaaggaatatttttggaagatatttcatt
aatttgaattcgttagaagcggaattagggtgcgatttggatgttgatatcgataatgga
attttagctgcgtattgcaccgctgtcaagaagccaagagtggaagctaatctcaaaagg
aaggtgcaaatttttatgcaagtgttgaaggatcaagttgaagaagaagattatttggga
ggaaccagagtagtggttgggttagggtatgaagtacaagaaattttatttccacaagat
tttattacaatctttatccgatcacttgatccgagcgtaagtaaaactgaattaaagtgg
cacctggaattgcacggaatttctttccgaaatttggacctgcgctcgtatgaaactaat
cagactgctgttattaaattttattcaaaagcggatgctaaagttgcactggaagtttta
aagaaggaaaaatttaaagggaaagaactggacgttgctcgtgctgggatgggcccaaga
aggggagtgacacaggaagaagtttgtcgattaaagctctcttggtcattagctccatcg
gagggaagagcccaaatttgtttccacacagctgctgaagccaataatttcgtggagaca
gtaagcacacgatttggtggggccagggtcacggcgcttcatggacatgtggaatctaag
aactcgaaacaccaacgtaacaaaccacagcctccagcaatggtcttgagagggatcccc
gacggagcctgtagatatcggttcgtcgtcgaagaggatctagaaccgaatgaacaacaa
tttgattataggctcacgttgggaagccttcctctcgatattgatgaacaagagttattc
agaagagttaaaccaacgattccgaaatgggcaagagttaatcgtaccgttagtacagcg
acaaaagaaaaatatgaaattacaatttcagatgaagaattaaaagataaactggcccca
tttgaagaatacatttcagacggtcagtgcccacagttctattctgataagaatcttgga
cgtgcaatcctatatgttccagtggataacaaactagcacttcagaaggcatcaaaaatt
gattattgctcaatgaaggaagacgtatatggacaaccccatcgacttgagattgaatat
aaccacaccacttctgttcatactgatttatacaagtttatcaaggatgatattgttcaa
attaagaatatggcctacaagaaaggggcacaagtttgggatagtgcagattgcaataac
aagtatgggacaaagacgaccaagtccaaattcatttttttgaagtttcgaacgtgtaat
cctcgcttaattggagaacttcaaaaaagtttggaatctgtatcaagttacacaaaattc
aaccatgaaagccttcatctacttttgaccactactggaaaattagaattggatcgtatc
ggcaaaactgcctttctctatttaaacccccgaaataatgggctgtacatttatggacgc
ccagaaattcaagagaaaactaagaaacaacttttatcaagtatcaagtatttcacgacg
ctcgaagtagtcgataggccactaatgatttcaaaaaagaagataaatttacgccgcgga
aaagcttctgccgccgacgtgtccaaacttgaacgtgcttgtaaaagcagcggagttgat
tattatgactttgtagggaatcgaattttggtgtcgggttcggagaaggcatttgcgaaa
ctcaagaatattttggagaaggatggtctgctttatgagaagagtccttcccatcttgct
aaactaaagggccgtccagattgtaccatttgtctgatgccaccagacagtgatttcata
caaagcagcatctgcccacatgctttctgcattgattgcctacagccaatgtttaatata
atgccaccagcattaccggtcaaatgtcaaggagaagattgtcaaaagttgttaggaatt
ggagatattaccaaaaccgcaaagaaagaatcactcaaaaaatatctcgaagtggccgtt
gtcaaatatcaacaggagcattctactcttttccttatgtgtccaaaacaagactgcgga
caaatcttatgcgcttctgataaaattattggagaacgaggtggcgaattttatttttgc
gacgagtgtgtcacgacttattgcattccgtgctccctgaaagctgaaaaaccatgtaag
agccatgaatatgatacttgtgaagaagccaggagtggtctttcaaacgaagttcaaatc
cacgtgcggcgcatacaagaagatattcttaatcttcaatgtccacgatgtaaaactgca
ttttatgatttcgtgggatgtgtggcagttacgtgtgaaagttgtaagtgcggtttttgt
gggctgtgtcttaccgattgtggtaatgatgcacacgctcatgctcggcaatgtccaaag
aatcccaaaaagaatgagtactatgcctctcaggtcgtaattgatagagttcatcgagaa
ttaaaggtgcaaaagttacaagaatatcttaaagatattgagataaacggagcagagcct
cgggttatagaaagtattcgccgtgccattcgacaggatttgattgatcttgaaattcct
acattttga
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integrated database retrieval system
