Folsomia candida: 110845851
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Entry
110845851 CDS
T05043
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
fcd
Folsomia candida
Pathway
fcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110845851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110845851
03012 Translation factors [BR:
fcd03012
]
110845851
Enzymes [BR:
fcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110845851
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110845851
Translation factors [BR:
fcd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110845851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_19
ResIII
nSTAND3
NPHP3_N
ATPase
AAA_22
PhoH
ABC_tran
FtrD-like
AAA_23
Motif
Other DBs
NCBI-GeneID:
110845851
NCBI-ProteinID:
XP_021948065
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MKNCSVRQFKSYSLDVLCCRTLFRRTLRNVSAASVMNRRGDGGGGGSHRLYNRGRGRGRR
VGSTPSTSDRREAAVDDAPRERPPPHLKGRDIGLWYARQQGTKAKEEEILGAMDIEVNHS
MTRHLTSLISAFDKSVQGFGGSSSSDSSCSFSVLLDDINNPKPQPEGIIIPCQLTRDESK
DQMMLEDLHRFQSTRQFQNLLCFRERLPASKCKEEIIQSIAANQVVVISGETGCGKTTQI
GQYILDDMIMQRKGSVCNILCTQPRRISAVSVAERVAEERCERVGGKSVGYVIRLESKRP
KRDEGAITFCTTGVVFKYLKDDPHLTRYSHLIIDEVHERDTNSDILIGVLRDLIKVRPDL
KVVLMSATINATHFSTYFGECPMFNIPGLTFPVHEYYLEDIIEQLNFKFEIDEDACGPFS
NYTPYFSDKEYAKYLTDYVRRSLRDRSKYSLATINEILKPESEKFEFLMKLTERLLIKIQ
ELDDSNSAVLIFVTGWDEISKLNKRLIESGKFPENKFLILPLHSMMPTVNQRQIFDRPPP
GKRKIIIATNIAETSITIDDVVHVIDFGKIKMTNFDKTRNVETLESEWVSRANAKQRRGR
AGRIQEGYCYHLFTKARESTLDDFQKPEVLRKRLEEVILQLKLLKVGDIRSLLRKLLDPP
SKHAVDLSFDRLVLLHALNSDEKLTPLGYHLSHLPMHPQTGKMILLGAVFSVVDPVFSIA
ASLSYKDPFVMPLGKEHVVDNLRKSLAGGSKSDHWAIAEALSGYEKAVARNCERDYCFKN
FLSLSTCKLLTDFKQQFCDQLHHMKFLTSNNPKDPERNLNSSNIALVKAVVCAGLYPNIA
KVRLKNSRGGGPPFPLLRTKEDGSVYIHKKSVNAQETKFECPFIVYHNKQKLKQIMLFDT
TMISPYPLIFFGANLAHKVTKGVSFVEIDGWNRFKISKDGCDTIEALRATLEKILAQKIA
HPSPTDWRDCSLEGQLLASIRDLITMQYYQIMNPDDYSDANDPYCW
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattgttccgtgaggcagtttaaatcctattctctagacgttttatgttgtagg
acgctgttcaggagaactttgcgaaacgtgtccgctgccagcgtgatgaatcgtcgcgga
gatggtggcggtggaggatcacacagactctacaatcgaggtcgtggtcgtggtcgtcga
gtaggttcgaccccctccacttcggacagacgggaggcagcagtagacgacgctccacga
gaaagaccgccgccacatctaaagggcagggacattggtctctggtacgcacgccaacaa
gggacgaaggctaaagaggaagaaattctcggggccatggacattgaagttaaccacagc
atgactcgtcacttaacatcgctgatatctgcgtttgacaaatctgtacaaggctttggc
ggatcatcatcttctgactcatcctgctctttctcagtcttattagatgacattaacaat
ccaaaacctcagcctgaaggcatcattattccatgtcaattaacacgagatgaatcaaaa
gaccaaatgatgttggaagatctgcaccggtttcaaagcactcgccaatttcaaaaccta
ttgtgttttcgcgaaaggcttcccgcaagcaaatgcaaggaagaaattattcaatccatc
gcagctaatcaagttgtggttatcagcggcgaaacaggatgtggtaaaactacccagatt
ggacagtatatattggatgacatgatcatgcaaaggaaaggatcagtatgtaacattctt
tgtactcagccaagacgaatctcggctgttagtgtagctgaacgggtggctgaagaaagg
tgtgaaagagtcgggggaaaatcggtaggatatgtaattcgactagaaagtaagcgacca
aaacgggacgaaggagccatcactttttgtacgacaggcgttgtatttaaatatttaaag
gacgacccacacctcacgagatacagtcatctcatcattgacgaagttcatgaacgagat
accaattcagatattctcattggtgttttaagggatttgattaaggtgcgcccagacctt
aaggttgttcttatgagtgcaacaatcaacgctactcatttttcgacatactttggagaa
tgtccaatgttcaacatccctggtttaacatttccagtacacgagtactaccttgaagac
attatagaacaactcaattttaagtttgaaatcgacgaagacgcatgtggacctttctcc
aactacacgccttattttagtgataaagagtacgcaaaatatcttactgactatgtaaga
agaagtctacgagaccgtagcaagtactcacttgcaactattaatgaaattttgaagcca
gagtcggaaaaatttgagtttctcatgaaactgacggagcgacttttaattaaaattcaa
gagttggatgatagcaattctgctgttttaatatttgtcactggatgggacgaaatttcc
aaactcaacaaacgtttaatcgaatctggaaagtttccagaaaataagtttctgattctt
cctctccattcaatgatgcccacggtaaatcaaagacaaatctttgaccgaccacctcct
ggaaaacgtaaaattattattgctaccaatattgccgagaccagtattacaattgatgac
gtcgtacacgtcattgactttggaaaaataaaaatgacaaactttgacaagactcgaaat
gtggagacattggaatccgaatgggtaagcagagcaaatgcaaaacaaagaagaggtaga
gcaggcagaattcaggaaggctattgctatcacctattcaccaaagctagagaaagtact
ctggatgatttccaaaagcccgaagtactaagaaaaagactggaagaagtcattttacaa
ctaaagctattaaaagtaggagatattcgcagtttattgagaaaactattggaccctcct
tcgaagcatgctgttgatctctcgtttgatagactagttttactacacgccttgaattca
gacgaaaaattaacacccttagggtatcacttgagtcatttgcctatgcatcctcaaact
ggcaaaatgattctactaggagctgttttttcggtcgtagaccctgtattttcaatagct
gcctcgttaagctataaagatccatttgttatgccacttggaaaagagcatgttgtggat
aatctacgaaaatctcttgctggaggatcaaaaagcgaccattgggcaattgctgaagca
ttaagtggatacgaaaaagctgtagctagaaattgcgaacgggattactgcttcaaaaac
tttttgtccttgtcgacctgtaaattgctgaccgactttaagcagcagttttgtgatcaa
cttcatcatatgaaattccttacatccaataatccgaaagatcctgaacgtaacctaaat
tcttccaatattgcgttagttaaggctgtcgtatgtgcgggtctctatccaaatattgcc
aaggttcgtcttaaaaattcacgaggaggggggcctccctttcctcttctcagaaccaaa
gaagatggaagtgtatatatacacaaaaagtcagtcaacgctcaagaaaccaaatttgag
tgcccgttcatcgtgtaccataataagcaaaaattaaaacaaataatgctgtttgacacc
accatgatttccccttatccgttgatttttttcggagctaatttagcacacaaagttacc
aaaggagtttcatttgttgaaatagatggatggaaccggttcaagatatccaaagatggt
tgcgatacgattgaggctttacgagcgacattggaaaaaatacttgctcagaaaattgcc
catccttccccgaccgattggagagattgcagtcttgaaggtcaactgcttgcctcaata
cgagacttgatcacaatgcagtactatcaaataatgaaccctgacgattattctgatgca
aatgatccatattgttggtaa
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integrated database retrieval system
