Folsomia candida: 110845892
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Entry
110845892 CDS
T05043
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
fcd
Folsomia candida
Pathway
fcd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110845892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcd03400
]
110845892
DNA repair and recombination proteins [BR:
fcd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110845892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
110845892
NCBI-ProteinID:
XP_021948130
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MSKNDGKDLVEDGLYIAAFKRVSEQSAGTVRFFDTDGDGEKFVVYNNDARLASKELIGNI
SIRTCKYKIGNEEKVLDYAYIRRSNFETFVRDLLLVRQYRVEVFINESTTKGRIDWVPKY
KASPGNLAQFDDILFNNSGTEMTVNNGVMGIRIGNVDKTKTVGVAHVNLNECEIHLLEFA
DNDSLTNLESVLILLSPKEAVFPVVASQAGDVNTLRKIIERNRILINEKKIGDFDDKDID
QDMKRLLQFTKGKLRNISTLPEFDKKLAVSALAGTIKYLELLSGESYQNQFRVVPFDFGL
YVKMDLAACRALHLSLNNLEKNSRNNVNLQSTIDQCRTAQGHRLMAQYLRQPLVSKEKLE
ERYDLVQILMDDIILRQTLRDDHLRKVPDCQTFARKLYRKKCTLQDYYKSYLFLTTMDKM
LEDLKTHEGEKQHVLQSWFIDPLTTLDEELSKFKELIQTTLDLEMAGKGEYVVQADFDES
LLEFKNEMDSIQTEMGDLLYKVAKELGLEANKSVKLESNSQNGYFFRVTLKEEKSIRGNN
KFTMIRSTKGAVGFTNSKLIQLSDSYIGYRSQYESEQRGIVADMAGVAADYYTCFEQLGR
ILAELDVFTSFAFCSVNSTLPYVRPKLLPKGTGRIHFEGLRHPCIESFADVNFIPNDVDF
EKDKQNFYILTGPNMGGKSTFLRSVGIATLLAHVGCFVPATAAEVSIVDAILARVGASDS
LDKGISTFMAEMIEASYILKTATPDSLVIIDELGRGTSTYDGFGLCWAITKYLAKNVGCY
GILATHFHELTDLADEILTVANYHVAAIATDGGLTMLYKIQKGPCDRSFGIHVASYVGFP
KDVLDEAKQMSKVLEDYCQEEDTDDSEAAVKRRRDNKNAGQKVVDEFMDEIRQYCKEQVP
ANGTITEEAEAAFQSKFQELLREVKVKAAANPYLQHLLRQASAEADKNRVSKTCELMDTD
DNEEMDIGGHTDEENWYN
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaatgatggcaaagacttggtggaagatggactttatattgctgcttttaaa
agagtttcagagcaatccgctggaacagtccgatttttcgatacggatggggatggggaa
aagtttgtggtttacaacaatgatgcgagattagcatcaaaagagcttatcgggaatatt
tcaattcgtacctgtaaatataagattggaaatgaggaaaaggttttagattatgcatac
attcgtcgaagcaactttgaaacctttgttcgcgacctgcttctcgtccgacagtataga
gttgaggttttcattaacgaatcgacaacaaaggggaggattgattgggtgccaaaatat
aaagcatcgcctggtaatttagcccagtttgatgatatcctctttaacaacagtggaacc
gagatgactgttaacaatggtgtgatgggaattcgtataggaaatgtcgataaaaccaag
acggttggtgtggctcatgttaacttgaacgaatgtgaaattcatttacttgaatttgct
gacaacgatagtttaaccaatctggagtcggtgttgattttactttctcctaaagaagct
gttttccctgttgtagcgtctcaagctggcgatgttaacaccttgcgaaaaataattgag
cgcaaccgtatccttattaacgagaagaagattggagattttgacgacaaagatatagat
caggatatgaagaggctcttacagttcactaagggaaaactacgaaatatctcaacacta
ccagagttcgacaagaaattagcagtctcagcattggctggaactataaaatatttggag
ctcttatctggagagtcttatcaaaatcagtttcgagtggttccctttgatttcggtctt
tatgtaaaaatggatttagctgcatgccgagccctacatttgtccctcaataatttggag
aagaattctagaaacaatgttaacttacagtcgactattgaccagtgtcgcactgcacag
ggtcaccgtctgatggctcaatatttaagacagccacttgttagcaaagaaaaattagaa
gagcgctacgacttggttcaaattttaatggatgacataattttaagacaaacccttcgg
gatgatcatttgcgaaaagtaccagactgccaaacatttgcgagaaagttgtatagaaag
aaatgtaccttgcaagattattacaaatcttacctctttctaacaacgatggataaaatg
ttggaagacttaaaaacacacgaaggcgaaaagcaacatgtattgcagtcctggtttatc
gatccacttacgactttggacgaagagttatcaaaatttaaagagttgattcaaacaaca
ttggatctcgaaatggccggtaaaggcgaatatgtcgttcaagctgattttgacgaatct
ttgttagagtttaaaaatgagatggacagtattcaaactgagatgggagatctgttgtat
aaagttgcaaaggaactcggtcttgaagccaataaatcagtcaaactggaatctaatagc
caaaatggttacttttttcgtgttactctgaaggaggagaaatccatcaggggtaacaat
aaatttacaatgattcgatcaaccaagggagctgttggatttacaaattccaagttgatc
cagttgtctgattcttacattggctacagaagtcagtatgaatctgaacaaagaggaatt
gttgctgatatggcaggagtggctgctgactattacacatgcttcgaacaactgggtcgt
atacttgctgagttagacgtctttaccagttttgctttttgctcagtcaactcaacacta
ccgtatgttcgtccgaaattactacccaaaggtaccggtcggattcattttgagggtttg
agacacccatgtattgagtcttttgctgatgttaatttcatccccaatgatgtggatttt
gagaaagataaacaaaatttctatatcctcactggtccaaatatgggaggaaaatcaaca
tttttaagatcggtcggaatagctaccttgttagcccatgttggatgtttcgtacctgcc
accgccgctgaagtttctattgtcgatgctattttggcgagggttggagcaagcgactct
ttggataaagggatttccacattcatggcagaaatgattgaagcctcctatattttaaag
actgcaacaccagattctctcgtgattatagatgagctaggtcgtggtacgtcaacatac
gatgggtttggattgtgctgggcgattacaaagtacttggcaaaaaatgtaggatgttac
ggtattcttgctacgcatttccatgaactcactgatttggctgatgagattctaacggtg
gcgaattatcatgttgctgctattgctactgatgggggtctcacgatgttgtacaaaatt
caaaaaggaccctgtgatagaagttttggaatccatgttgccagttatgtcggattcccc
aaggatgtgctcgatgaggcaaaacaaatgtcaaaggtcttggaggattattgccaagaa
gaggacactgatgacagtgaagctgctgtaaaaaggagacgtgataacaaaaacgcggga
caaaaggtggttgacgaatttatggatgaaatccgacagtactgtaaagagcaagttcct
gctaacgggacaattacagaagaagcggaagcagcatttcagtcaaagtttcaagaactt
ttacgagaagtcaaagtaaaggctgctgcaaatccgtacctacaacaccttcttcgtcaa
gcttcagctgaggcggacaagaatagggtatcaaaaacctgtgaattaatggatactgac
gataatgaagaaatggacattggaggacatactgacgaagagaactggtacaattaa
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