Folsomia candida: 110846231
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Entry
110846231 CDS
T05043
Name
(RefSeq) protein patched homolog 1-like
KO
K12385
Niemann-Pick C1 protein
Organism
fcd
Folsomia candida
Pathway
fcd03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
fcd04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
110846231
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110846231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcd02000
]
110846231
Transporters [BR:
fcd02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
110846231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
NPC1_MLD
ACR_tran
TMEM72
DUF6798
DUF1091
Motif
Other DBs
NCBI-GeneID:
110846231
NCBI-ProteinID:
XP_021948599
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MDTRGSFPHQSGEQEGLASLCEIGDPIMKTNKKFSATSYTSSTRFQRFVISFTGSVENFF
YRWGYGVASHPYQTLTACLLFTLICSMGLMNFTYEDRPDKLLISQTSQLAYHTDWLRNNF
PSPVRFSVVIFGADNVLTPQVFSKIMDVQERIENITVKGRKWNEICFKLPVTKGITVNSR
KRRNLESSFEDDFFNSDINSNDDESINNTRNDAKQNDPYYDSMLSIDDDIYCEFVESLDS
ACWQISPLELWEFNRTIIDNLTQDEIIRKINHEKISPIFGRPVNFTTELGGKITKNDKGE
VIGATSIMVLWSISVNKTALKTGQAVRDDGTGELADEISLAWEKEWLAAMEQYDATINKS
ALSFNYVSGRSFGDVYKQTMYNDMKIVILGYAVMFVYVGLMLGRFNMIEQRPYLSLAGIS
CAALAGLVTCGICSTFGLAFGNVNKVLPFLLLGVGVDDMFVIMQCWKNLYPNVLAKKYKE
SIPQRIGISLRTAGASITVTSLTDMAAFAVGATTVLPGLKSFCIYSAVGIIAVFFFQVTF
FIACLAIDQKRLENRRNAFIFWKQYTEADYVPNKWSQSSYIQIFFEKILTKVILSTPGKV
CVLLITLMFLGINTNGNLRLRQEFDPMWFLAQESHIVKYINAKKVYYPYTGFNGFIVADQ
VNWTASFPGFENFVRKMKDADAIFLFDPWYDDFKKYSNRNFKTDIPNKQITPEKFQRYLG
KFLFSRVGSKYRQYFRAEKELTCGQRASPIEISMMPFKFKYFRGRDEHIPGMNSLKTLVK
NADMKFNNGSGGRLFPWSSVFVSWETDEIITDELYRNVTLSLICVLITIFFLLFNFRVCL
FCGICVIFTVIDVGGVMYYWGLSIDTITTVANVVAIGLCVDYAAHIGLAFLMSTGSKDER
ATKALTDIGPAVLNGGFSTFLGIILLANSETHALQSFFKVLTAVVFFGLWHGLIFLPVLL
SLVGPDPYPVTILVSKGTHGPVPPADHEAPVNMKNENIEWLPLSQTTNTCDDINATKGNG
KV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggataccagaggatcatttcctcaccaatctggggaacaagagggacttgcttcgttg
tgtgaaattggggatccgataatgaagacaaataaaaagtttagtgcaacgagttacaca
agttcgaccagatttcaaagatttgtaatttcattcactggttccgtggagaattttttc
tatagatggggatacggagtggcaagtcatccttaccaaaccctgacagcgtgcctcttg
ttcactttaatttgtagcatgggacttatgaatttcacatatgaggacaggccggataaa
cttttaatttctcaaacgtctcaacttgcatatcacacagattggctaaggaacaatttt
ccttctcctgtgaggtttagcgttgtgattttcggcgcagataacgttttaacgcctcag
gtgttttcaaagatcatggacgtacaagagcgaatagaaaacattactgttaaagggcgc
aagtggaatgaaatttgtttcaagttgccagttacgaaagggatcactgtgaactcgaga
aaacgccgcaatttggaaagtagctttgaggatgacttttttaactcagatataaatagt
aatgacgacgagtcaatcaacaataccagaaacgatgcaaaacaaaatgacccttactac
gattccatgcttagtattgatgacgatatatattgcgaatttgtggagagtttggacagt
gcatgttggcaaatcagtccactggaattgtgggagttcaacagaacgataattgataat
ttaacccaagacgaaattatccgaaaaatcaatcatgagaaaattagtccaatatttggg
aggcctgtcaacttcacaacggagttgggtggaaaaattacaaaaaacgataaaggggaa
gtcattggagccacgtcaattatggtactttggtcgataagtgtaaataagacggcgtta
aagaccggccaagcagttagagacgacggtacaggtgagcttgcagacgaaatttccttg
gcatgggagaaagagtggcttgcagcaatggaacaatatgatgctaccattaacaaaagc
gctttgagtttcaactatgtttccggccgaagttttggagacgtgtataaacagaccatg
tacaacgacatgaagattgtaattcttggctatgccgtcatgtttgtttatgtcggatta
atgcttgggagatttaacatgattgaacaaaggccttacttatcattggctggcataagc
tgtgctgctcttgctggactagtgacttgtggcatttgctccacgttcggtctagcattt
gggaatgttaacaaagttttgccttttttactcctcggggtcggtgtcgacgacatgttt
gtgataatgcaatgctggaaaaatctttaccccaatgttttagcgaaaaaatacaaagaa
tcaattcctcaacgaattggtatatctctaagaacggctggagccagtattaccgtcaca
tcgttaacagatatggctgcttttgcagtcggagcaactacagtcctacccggattgaag
tcattctgtatttactctgctgtaggaatcattgccgttttcttctttcaagttacattt
tttatagcgtgccttgcaattgatcaaaagcgactggaaaatcgacgaaatgcatttata
ttttggaagcagtacacagaggcagattatgttcctaacaaatggagtcaaagcagttat
attcaaatattctttgagaaaatattgaccaaagttattctttcaactccaggaaaggtg
tgcgtactattaattaccttaatgttcctgggaattaacacgaatggtaacctgaggctt
cgacaagaattcgacccaatgtggtttcttgcacaggaatcccacattgtaaaatatatc
aacgccaaaaaggtgtactatccatacacgggatttaacggattcattgtggcagatcaa
gtcaattggacagctagttttccgggctttgaaaactttgttcgaaaaatgaaagatgca
gacgccatatttttatttgacccttggtacgacgactttaaaaagtattccaacagaaat
ttcaaaacagatattccaaacaagcaaattactccagaaaagtttcagagatatttaggg
aaatttctatttagtcgcgtcgggtcaaagtacagacagtattttagagctgaaaaggaa
ctcacttgtggacaacgggcttctccgattgaaatatccatgatgccattcaaatttaaa
tatttccgaggcagagatgaacatatccctggaatgaattcacttaaaacccttgtgaaa
aatgcggacatgaaatttaacaatggatcaggtggacgactttttccttggagttccgtg
tttgtcagctgggagaccgatgagattattactgatgaactgtataggaacgtcacttta
tctctgatatgcgtcctcattacaatatttttccttctatttaactttcgggtttgctta
ttttgcggaatatgcgtaatcttcactgtcatcgatgttggtggggtcatgtattattgg
gggctcagtattgatacgataacgacggtggcaaacgtcgttgcaatcggtctttgcgtt
gattacgcagctcatattggactggcgttcttaatgtccaccgggagtaaagatgagcgt
gcaaccaaagcgttgacggatattggtccagccgttttgaacggagggtttagcacattc
ttgggcatcatacttttagcaaactcagaaactcatgcattgcaatcattctttaaggtc
ttgaccgcggtagtgttttttggattatggcacggtttaatattccttcctgtgctgttg
agtctcgtgggaccagatccttacccagtaacaattttggtgtcaaaaggaactcatgga
cctgttccaccggcagatcacgaggctccagtgaatatgaaaaatgaaaacatagaatgg
cttcctctatctcaaacaacgaatacttgcgacgatattaatgcaacaaagggaaatgga
aaggtttaa
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