Folsomia candida: 110846367
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Entry
110846367 CDS
T05043
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fcd
Folsomia candida
Pathway
fcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110846367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcd03041
]
110846367
03009 Ribosome biogenesis [BR:
fcd03009
]
110846367
Enzymes [BR:
fcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110846367
Spliceosome [BR:
fcd03041
]
Complex A
U2 snRNP components
U2 related factors
110846367
Complex B
110846367
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
110846367
Ribosome biogenesis [BR:
fcd03009
]
Eukaryotic type
90S particles
Helicases
110846367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
nSTAND3
AAA_19
SRP54
AAA_22
Flavi_DEAD
ResIII
AAA_25
ABC_tran
ATPase
T2SSE
PhoH
TsaE
AAA_30
AAA_29
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
110846367
NCBI-ProteinID:
XP_021948783
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MASRRPRLDVAETNLAKKPKLAEFTTPALGASVGVAVKPDVQLNPHTGMMFTPRYFELLK
KRTQLPVWEYKDKFMELIHKHQIIVLVGETGSGKTTQIPQWCVDYAKAVGKRGVSCTQPR
RVAAMSVAQRVSEEMDVCLGQEVGYSIRFEDCSCSKTVLKYMTDGMLLREGMSEPMMEQY
QVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVVMSATLDAGKFQQYFDNAPLMNVPG
RTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEETEGDVLLFLTGQEEIEEACKRIKREVD
NLGPEIGDLKCIPLYSTLPPNLQQRIFEQAPPRKANGAIGRKVVVSTNIAETSLTIDGVV
FVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAFKNEM
QENTYPEILRSNLGSVVLNLKKVGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGN
LTELGAMMAEFPLDPQLSKMLIASTEFDCSNEILSITAMLSVPQCFVRPNDTKKAADDAK
LRFAHIDGDHLTLLNVFHAFKQNHEDPQWCYENFINYRSLKSADNVRQQLSRIMDRFNLK
RTSTEFTSREYYVNIRKAQVAGFFMQVAHLERNGTYLTIKDNQTVQLHPSTCLDHKPDWV
VYNEFVLTTKNYIRTVTDVKADWLLQIAPQYYDLANFPQCEARRQLELIQTKLESKQFQT
KF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggccagccgaagaccccgtttggacgtggcggagacgaatttggctaagaaacccaaa
ttggcagagtttaccaccccggctcttggggcaagtgttggtgtggcggtgaaacctgat
gtacaactcaacccacacaccgggatgatgttcaccccacgatattttgaacttctcaaa
aaacggacccaacttccggtctgggagtacaaggataagttcatggagttaatccacaag
catcaaattatcgtactcgtgggtgaaactggatctggcaagacgacacagattccacag
tggtgtgtcgactacgccaaggcggttggaaagaggggcgtttcttgtactcagccgagg
cgagtggccgccatgtcggtggcgcaacgtgtctcggaagagatggacgtctgtctgggt
caagaggtcgggtacagtattcgattcgaagattgttcatgctcgaagacggtgttaaaa
tacatgacggacggtatgttactccgggaaggaatgtcagaacccatgatggagcaatat
caggtcatcttgttggacgaggctcacgaaaggacactggcgacagatattctgatgggc
gtgctaaaggaagttatcaaacagagaagcgatttgaaattggtcgtcatgtcggccaca
ttggacgctggaaagtttcagcaatactttgacaacgcgccactcatgaatgtgcccggg
agaacacatcccgtcgaaatcttttacactccggagccagagcgagattatcttgaggcc
gcgatccggactgttattcagattcacatgtgtgaagaaacggagggcgacgttctcctc
tttctcaccggacaagaagaaattgaagaggcttgcaaacggattaaacgtgaagtggat
aatctcggaccggaaattggcgacttgaaatgtataccgttgtattccacgctacctcca
aatctacaacagagaatttttgaacaagctccgccacggaaggcgaatggtgccattggt
cgaaaggtggtagtgtcaaccaatattgccgagacttcgttaaccattgacggtgtcgtt
tttgtgattgatcctggatttgcaaaacagaaagtgtataatccccgaattcgggtggaa
tctctacttgtgtcgccaattagtaaggcatctgcacaacaacgagctggacgggctggg
cgtactcggccaggaaagtgtttcagactgtacaccgagaaagcgttcaagaatgaaatg
caagaaaacacataccccgaaattttgagatcaaacttaggatctgtcgttttaaactta
aagaaagttggaattgatgacctcgtgcattttgactttatggatcccccagcacccgag
acgctcatgagggcattggaactattaaactatttagcagctctggacgatgatggaaat
ctgaccgagctgggcgccatgatggctgagttcccattggatccccaactctcgaagatg
ttaattgcatctaccgagtttgactgttcgaatgaaatattgtccatcacggccatgtta
tcagttccacaatgctttgttcggccaaacgatactaaaaaggctgctgacgacgcaaag
ttacgtttcgctcacattgacggggatcacttgacccttctcaacgttttccacgccttc
aagcaaaatcatgaagacccacaatggtgttatgaaaactttatcaattaccgcagtttg
aaatctgccgacaacgtaagacaacaactctcccgaatcatggacaggttcaacttgaag
cgtacttcgaccgaatttacatcacgagagtattacgtcaatatacgaaaagcacaagtg
gctggattctttatgcaagtcgcccatttagaaaggaatggcacatatttgacgataaaa
gacaaccaaacagtccaactgcacccatctacatgtctcgaccacaaaccagactgggtc
gtttacaatgagtttgtcctaactaccaaaaactacattcgcaccgttacggatgtcaag
gccgactggctgctgcaaatcgctcctcaatactacgaccttgccaactttccccagtgt
gaggcacgccgtcaattagaacttatccagacaaaattggaatcaaaacaatttcaaacc
aaattttga
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