Folsomia candida: 110847178
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Entry
110847178 CDS
T05043
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
fcd
Folsomia candida
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcd03009
]
110847178
Enzymes [BR:
fcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110847178
Ribosome biogenesis [BR:
fcd03009
]
Eukaryotic type
90S particles
Helicases
110847178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
AAA_22
ATPase
AAA_30
Motif
Other DBs
NCBI-GeneID:
110847178
NCBI-ProteinID:
XP_021949748
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MGGDRKGKGFNQKGPQGQRVGKKGKKKDGDVNAKSCAQQIAVDSSAFDGKYDEANPLLLP
QKPKKEKGQHKEEGGAGRVQFAKKLLSKKQRKRLQQIVDRREKKSGRAELLEELQKYQLP
AETFQKLTPLVQVQTEGLKKLFSQIQKDKVLEDEKERVRKGNKRARGESDDDDDDHDEDI
NYGVLAVAEPVKKKLRPKSSIKGANKLKNQNQHKFRSWSGRFGVKGVDKKNDPKVLGFEE
ESSSDEDVSNDLESIPLAIKEEETSTNYNEEDFAGDDQVEIVPEDEEAKTKSNIVEVINL
TGGEIPPEVNGLTESKKAKKAKKKQLSSEKNDIVPPRVAKTFVPVHRTKEIELVRSKLPI
IPEEQIIMESITENPVTVLAGETGSGKTTQIPQFLYEAGYSLNGKIIGVTEPRRVAAIAM
SMRVAKELNLPTDVVSYQIRFDGNVTPRTQIKFMTDGVLLKEIERDFLLSKYSAICVDEA
HERSLYTDLLIGLLSRCVHIRKKRNDPLKLVIMSATMRVEDFVENAILFRSPPRLIHVPT
RQFPVQVHFSKFTPENYLVAAYKKVVQIHRKLPPGGILIFLTGQQEVRTLVKQLCKIFPS
ASEQDDCEDVSSFVPSSTSKKRMSKFKKKEKSKEIRTLASKLKTFDLEKLQANPLKSEEE
EDENDNFEESEDEDNEWGDDISGPKEPLHVLPLYSMLPNKEQQKVFESPPNGTRMCVVAT
NVAETSLTIPSVRYVVDCGKVKQKVWDKLTGVQQFQICWESKASAEQRTGRAGRTGPGHC
YRLFSSSVFTDEFSAYSKPEIQVRPVDDMMLLMKSMGIDRVQNFPYPSSPATAQLVAAEK
TLLSLGALQTKEKSTLKPRVSNKSSLHLEDNTIISELGKTMSHFPLGPRFSKMLALSFHH
SLVEFTIALVSALTVQEVFLDASLHDSGKDVKSSWAVLRRKWAGSGSSFLLGDCMVLLRA
VGAFEYSGGTPEFCLKTGLRFKAMNEIRKLRKQLTSEVNLMVSEGEEVPLNPNMEPPTEE
QAVLLRQIILSGLPDRVGRKILESELREGEDPKVYRHAYRCDELEDPVFLHTSSVLRSTK
PQWIVYQEVFESNGKMYLRGVSAIEPDWIPLFCKTLCKLENPLKDPPPFFNKDKGDVYCS
VKATYGKQGWELPIVETEYPIFLEKFKLFAQFLLEGLVFPKLGKWREKLLSMPITMTKPW
AKLQPRTQTLLLPLTKNGIHSKSLLEERWKLDQSFLLSEYLTWLPDDIHNEVKSEWPPIE
SSVV
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgggcggagataggaaaggaaagggcttcaatcaaaagggaccccaaggtcagcgtgta
ggcaagaaaggcaagaaaaaggacggtgatgtcaatgcaaagagttgtgctcagcagatt
gccgtagactcgtctgcatttgatggtaaatatgacgaagccaatccattactcttgcca
caaaagccgaagaaggaaaagggacaacataaggaggaagggggtgcaggcagagttcag
tttgctaaaaaattattgagcaagaagcagcggaaacgacttcagcaaattgttgaccgc
agagagaaaaagagtggaagagcagaactgttggaagaacttcagaaatatcaattgcct
gcggaaacatttcagaaacttactccgcttgtccaagtgcaaacagaaggactgaagaaa
ctttttagtcagatccagaaggataaagtcttggaagacgaaaaggaacgtgttcgaaaa
ggaaataagcgagcgcgaggagaaagtgatgatgacgatgatgatcacgatgaagatatt
aattatggggtattggctgttgctgaaccagtaaagaagaaattaagaccaaagagcagt
atcaaaggtgccaacaagctcaagaaccaaaaccaacacaagtttagaagttggagtgga
cgatttggggtgaaaggtgttgataagaaaaatgatccaaaagttttgggatttgaagaa
gaatcgtcttctgatgaagatgtgtcaaatgacttggagagcataccactagcaattaag
gaagaagaaacttcaacgaattataacgaggaagattttgctggcgatgaccaagtagaa
attgtccctgaggatgaagaagctaagacaaaatctaacattgttgaagtaatcaatctc
accggaggagaaattcctccagaagtcaatggtctgactgaatccaagaaggctaaaaag
gctaaaaaaaaacagttatcatctgaaaagaatgacattgtccccccccgtgttgcaaaa
acatttgtgcctgttcatcgaacaaaagaaattgagcttgtccgaagcaaattgccaatt
attcctgaagaacagataattatggaatcgataacggaaaatcctgtgactgtactagcg
ggggaaaccggaagcggtaaaaccacccaaattcctcaatttctgtatgaagccgggtac
tctttaaatgggaaaatcattggtgtcacggaaccgagaagagttgcagcaatagcgatg
tcaatgcgagtcgccaaagagcttaaccttccaactgatgtggtttcttaccagattcga
tttgacggaaatgtaactcccagaacacaaattaagtttatgacagacggagtgttacta
aaggaaatagaaagagattttcttctctcaaaatactctgccatttgcgtcgatgaggct
cacgaaagatccctttatactgacttgctcataggactattgtctcgttgtgttcacatc
cggaaaaaaaggaatgacccactaaaacttgttatcatgtctgctacgatgcgagtagaa
gattttgttgagaatgccatcttattcagatctccacctcgtctaatccacgttcccact
cgacaattcccagtgcaagtgcattttagcaagtttactccagaaaattatctcgttgcc
gcatataaaaaggtggttcagattcatagaaaactccctccagggggaattcttattttc
cttacgggacaacaagaagtgagaactcttgtaaaacaactttgcaagatatttccgtct
gcatcagaacaagatgattgcgaggatgtttcatcgtttgtgccgtcttctacgagtaaa
aaacgcatgtccaaatttaagaagaaagaaaagtcgaaagaaattcgaacgttagcttca
aagttaaaaacatttgacttggaaaagttacaggccaacccactgaagagcgaggaagag
gaagatgaaaacgacaactttgaagagtctgaagatgaggacaacgagtggggtgatgat
atatctggtccaaaagaaccccttcatgttcttccattatattccatgttacctaataaa
gaacaacagaaggtatttgaatcgccacctaatgggacaagaatgtgtgttgttgctaca
aacgtagcagaaacgtcgcttacaattccttccgtccgttacgtcgtggattgtggaaag
gtaaagcagaaagtttgggacaagcttactggagttcaacaatttcagatatgttgggaa
tccaaagcatccgctgaacaaagaacgggtcgcgccggtcgtactggaccaggacattgc
taccgacttttttcgtcctctgtatttacggatgagtttagtgcatattccaaaccagaa
atacaagtcagaccagttgacgatatgatgctgctaatgaaatcaatggggatagaccga
gtccaaaactttccttatccttcctcacctgccactgcgcaactagtcgctgctgaaaaa
acactgttatccttgggagcattgcaaactaaggaaaagtcaacgctgaagccgagggtg
tcaaataaatcatctcttcatctagaagacaatacaataataagcgaattaggaaaaaca
atgtcgcattttcctctgggtcctagattttctaaaatgctcgccttaagctttcatcat
tccttagtggaatttacgatcgcacttgtttctgctctaaccgttcaggaagtattcctt
gatgcctcattacatgattccggaaaagatgtgaaatctagctgggctgtactgagaaga
aaatgggctggaagtggttcttcgttcctattaggcgattgtatggtacttctgagagca
gttggcgcttttgaatattcaggagggactcctgagttttgtctaaaaactggtctaaga
tttaaggcgatgaatgaaattagaaaacttcgaaaacagctcacatctgaagtaaacttg
atggtgtcagaaggggaggaagtgcctcttaatccaaacatggaacctcccacggaagaa
caggctgtccttttacgacagattattctcagtggacttccagatcgagtgggacgaaag
attttagagtctgaattaagagaaggagaagaccctaaagtctatagacatgcgtatcgg
tgtgatgaattagaagatcccgtctttcttcacacatcgtccgtcctccgttcaacgaaa
cctcaatggatcgtttatcaagaggtgtttgaatccaatggaaaaatgtaccttcgtggc
gtctctgcaatagagccagattggatcccattattttgcaaaacattatgtaaattggaa
aatccattaaaagatccacctccattcttcaacaaagataaaggtgacgtgtactgttct
gtaaaagctacatatggaaagcaaggctgggaacttcctatagttgagacggaatatccc
atattcctcgaaaagtttaaactgtttgctcaatttcttttggagggtctcgtatttcca
aaacttggcaagtggcgagagaaactgttatcaatgccaattacgatgaccaagccttgg
gcgaagttacaacctcgcacccaaacattgctgctccctctcaccaaaaatggaatccat
tctaaatctctattagaagaaagatggaaactggaccagtcgtttttactctcagagtat
ttgacatggcttccagacgatatacacaatgaagtaaagtctgaatggcctccaattgag
tcatcagtagtgtag
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