Folsomia candida: 110847224
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Entry
110847224 CDS
T05043
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
fcd
Folsomia candida
Pathway
fcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110847224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110847224
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
110847224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_16
TPR_12
TPR_11
TPR_6
TPR_19
ARM_TT21_C
DUF7017
TPR_9
ANAPC3
TPR_21
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
110847224
NCBI-ProteinID:
XP_021949813
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MDDGDGLDQWIILNILLNAKKFNFDSLSNIVNLAEEKGVQHLIVDFYRVVSSVEDKTNSE
DMKNTIDRHLETIPPKSGNEEKFSVYVRLEAAILLFNLSFYKESADLLFNLTAMKYGRIL
PLAWKYLGKLYSLQNDVELASKCYKKAYKLSPTVEVGALLSDTYFSLGKEDINQELLVEA
TKAFVKSKSKWAWLRLGVLYLNNGDANSAVTALQAAIRSDITDSYVWESLGDAYFLRGSY
SAALNTYNKALELDPNSMYAKLKVGVVYQCLGHHDKSIETLKNVLNDFPENPTPILVELA
RTSSMIAQELSVENFDVRAQMATEDSVAYAVLAILQSPRRILLPWKIIGESSLTLNNLTD
DYLVKVPTFLLGENPQSLDPSKVKSVEDFEYKRVSLDKLREIGIQALLECLRVMEEPDED
VTFSVNLRAYVYHQLGLLYFHRARRSQDTKMSSEMYKKAMIAAKKAVASNQTQYIFWNSL
GVISYFVGNDELAQHAFIKSLEIEGSNVVAWCNLGMLYLKHDNPMLAHQIFYKAQSASPL
HATSWIGQGLFAESIEHIEAPDLFRHAAHLDPSAFAVSCYADWVCRILLKEVNLSPTDFW
FSITRVDALTTVNDLITKVEARNRTPQLYNMKGIIAALNSFYTTALESFDTALELATSNS
AFSMTEENVQQILVNKIVILVKLEMFNEAVDAFSSIENLDIVGYAVGALTMIKLGYLDQS
EKLYEQLLATLPESSSHDGDRINATIGLGLVHNLHFGPEAACNLLLQDFMVKSPHGLLAL
AAIGIMNGDSEFVSNVMPHLEEFKDEESVLPDIGLLKACFHIMNGNSKRGVDVLLKLIHN
NPLNVRLWTFLSQIVFRHELQTIQSFTILRTTMTALKLSSLVPKGVVDRVHFTSSAMVSL
CHVMNDDSKTAITSALNGIRKFPKERENWIVLACAFWYKYVETRNIESYKIVVNILEKEL
TLNRINKRAVDWSQAFLKHVKSHCPS
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggatgatggtgatgggctggaccaatggattattttgaatattctcctcaatgcaaag
aaatttaattttgattccctcagtaatattgtgaaccttgccgaagagaaaggtgtgcag
catttgatagtagatttctacagagtcgtaagtagtgttgaggataagacaaattctgaa
gacatgaaaaataccatcgacaggcatctcgagacgataccaccaaaaagtggtaatgaa
gaaaaatttagtgtttatgttcgcttggaagccgcaattctactctttaacctaagcttt
tacaaagagtctgccgatctgctcttcaatcttactgcaatgaaatatggtcgaattctt
cccctagcctggaaatatttgggaaaactttacagtctgcaaaatgatgtcgagctggct
tcaaagtgttataaaaaggcctacaaattgtctcctaccgtagaagttggtgcattacta
agcgatacatacttttcattggggaaggaggacattaatcaagaattactagttgaagct
accaaagcgtttgtgaaatccaaatctaagtgggcatggttgcgactgggtgttctttat
ttgaacaatggcgatgcaaattctgctgtcacagcactacaagcagcgattcggtccgat
atcactgatagctacgtgtgggagtctttgggagacgcttattttcttcgtggctcctac
tctgctgccttgaacacttacaataaggcattagagcttgaccctaactcgatgtatgct
aagctgaaagttggagtggtttatcagtgtcttgggcatcacgacaagtctattgaaaca
ttgaagaatgtccttaacgatttcccggaaaaccctaccccaattcttgtcgaattggca
cgtactagttccatgattgctcaagaactgtcggtcgagaacttcgacgtacgagctcaa
atggctactgaagattcagtagcttatgccgtgttggccattctacagtcgccaagacgg
atcctcctaccctggaaaattattggagaaagttctttgacattaaataatctaacggat
gattatctggtcaaagtgccaacattcctgcttggggaaaatccacagtcattggatcct
tctaaagttaagagtgtggaggattttgaatataaaagagtatccttagataaattgaga
gaaattggtattcaagccctattagaatgcctacgagtaatggaggaacctgatgaggat
gttacattttcagtgaatcttcgagcctatgtgtatcatcaacttggtttgttatatttc
caccgagctcgtcgttcccaagatactaaaatgtcttctgaaatgtacaagaaagccatg
atcgctgcgaaaaaggctgttgcgtcgaatcaaacgcaatacatattttggaattctctt
ggagtaatatcgtattttgttggaaatgacgagttggctcaacacgcctttatcaagtcg
ttagagatcgaagggagcaacgtcgtcgcatggtgtaacttgggaatgttgtacttaaaa
catgataacccaatgctagctcatcaaattttttacaaggcgcaatctgcatctcctttg
catgctactagttggattggccaggggctttttgctgaatccattgaacacattgaagct
ccagatttgtttcgccatgcagctcatctagacccctctgcctttgccgtttcttgctat
gcggactgggtctgtcggatattgctgaaagaagtaaatttatctccaactgacttctgg
ttttctatcaccagagttgatgctctcacgactgtgaatgatttaattacaaaagttgaa
gctagaaaccgtactccccaactttataatatgaaaggaataattgctgcccttaatagt
ttttacactacggccttggaatcattcgacactgctttggaactcgcaacaagcaactcg
gcattctcaatgactgaagagaatgttcaacaaattctagtaaacaaaattgtgatactt
gtaaaactggaaatgtttaatgaagctgttgatgctttctcctcgattgaaaatttggat
attgttggatatgctgtgggagccttgactatgatcaaacttggatacctagatcaatct
gagaagctgtatgaacaattacttgcaacgttaccagaatctagttcccacgatggagat
agaataaatgcaaccattgggttaggcttggtacataatcttcatttcggtccggaagcg
gcatgcaatttattgttacaagattttatggtaaaaagtccccatggattattggctctc
gctgctattggaattatgaatggagattcggaattcgtgagcaatgtcatgccacatctt
gaggaattcaaggatgaagaaagtgtccttcccgacattggcttactgaaagcttgtttt
catatcatgaatggaaactccaaaagaggggtcgacgtactgctgaagctgattcacaat
aatcctttgaatgtgcgattatggacatttttatcacagatcgtgtttcgtcacgaactt
cagacaattcagtctttcacaattttgcgaaccacaatgacagctcttaaattgtcaagc
ctggtacccaagggagttgtcgatagggttcatttcacatcatctgccatggtctccttg
tgtcatgtaatgaacgatgattccaaaactgctattacctctgccttgaatggcatcaga
aaatttcccaaggaaagagaaaattggatcgtccttgcatgcgcattttggtacaagtac
gttgaaactcgaaacattgaatcatataaaattgtggtcaatattttggaaaaggaatta
actttgaatcgaattaacaaaagagcagtagactggtcacaagcttttctcaaacatgtg
aaatcacactgtccttcttga
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