Folsomia candida: 110847932
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Entry
110847932 CDS
T05043
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
fcd
Folsomia candida
Pathway
fcd03015
mRNA surveillance pathway
fcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110847932
09123 Folding, sorting and degradation
03018 RNA degradation
110847932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110847932
03041 Spliceosome [BR:
fcd03041
]
110847932
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110847932
mRNA cycle factors
Stress granule specific factors
110847932
Spliceosome [BR:
fcd03041
]
Complex C
Other components
Complex C specific factors
110847932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RBD_DEAH11
RRM_7
RBD_RDR6
RRM_RdRP1_2
RRM_5
DUF6375
Motif
Other DBs
NCBI-GeneID:
110847932
NCBI-ProteinID:
XP_021950672
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MQAAAQPNYPMTSLYVGDLHPDVTEAMLFEKFSQTGPVLSIRVCRDMITRRSLGYAYVNF
QQPADAERAMDTMNFDLMKKGRPIRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKDMYDT
FSTFGTILSCKVATDEHGNSKGYGFVHFETEEAANKAIDKVNGMLLSDKKLYVGRFIPRK
EREKELGEKAKRFTNVYIKNFPDGLGEEKLRDLFESFGKITSYKVMSDETGKSRCFGFVA
FEDAEAAEEAVNQLNGKEMDGKTVYVGRAQKKNERQQELRRKFEQLKMERLNRYQGVNLY
VKNLDDTIDDEKIRKEFAPYGTITSAKVMIEEGRSKGFGFVCFSSPEEATKAVTEMNGRI
VGSKPLYVALAQRKEDRKAHLTSQYMQRMVNMSSIRMPQMGQVYNPGSYFMPTIPQPQRF
YAPAQMGLRPSPRWPTAQARPAGQVPAFAMQPPFRAPRGAVAGAGQPLRALGRMPGPQNV
PGGPQPRAIGNGPQQMAAAAAAAAGQQPRGPTTQAPPAYKYQSSAMRTPGQPSGVVITGQ
EPLSASALAAAHPNDQKQMLGERLFPLIHEKYPTVAGKITGMLLEMDNSEILHLLDDRDL
LSSRVEEAVAVLQMHQTKQPSMPQQPTAAAN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccgcggctcaaccaaattatccgatgacttcgctctacgtgggtgatcttcac
ccagatgtaacggaagctatgctgtttgaaaaattttcccaaaccggaccggtcctttcc
attcgtgtttgccgtgacatgatcacccgtcgttcgctgggctatgcctatgtcaacttt
caacaacctgcggatgcggaacgagcaatggacacgatgaattttgacttgatgaagaag
gggagacccatcaggattatgtggtcgcaacgagatccatcccttcggaaatctggagtt
gggaatattttcatcaagaacttggacaagtcaatcgacaataaagatatgtacgatacg
ttcagtacatttggcactattctgagttgtaaggttgcaacagacgagcacggaaattca
aaaggctacggattcgtacacttcgagaccgaagaggctgcaaacaaagccattgataaa
gttaatggaatgcttctcagtgacaagaaactatacgttgggagattcattccacggaaa
gaacgcgaaaaggaacttggagagaaggcaaagcggttcacgaatgtctacattaagaat
ttccctgatgggctgggagaagaaaaattgagagatcttttcgaatcttttggaaagatt
acatcgtacaaggtgatgtcagatgaaacgggcaagtcccgatgctttggatttgttgca
tttgaagatgctgaagctgctgaagaagccgtgaatcagcttaatggcaaggaaatggat
ggcaagaccgtgtatgtggggcgtgctcaaaagaagaatgaacggcaacaggagctgaga
cgcaagtttgagcagttgaagatggagcggctcaatcgctaccagggtgttaacctatat
gtgaagaacttggatgacacgattgatgacgagaagatccgcaaggaatttgctccatat
ggtactattacgtccgcgaaggttatgattgaggaaggacggtccaagggtttcggattc
gtgtgcttctcatctccggaggaggctaccaaggccgtcactgagatgaatgggcgaatt
gttggctctaagcccttgtatgtggcactcgctcagcgtaaagaagaccgaaaggctcac
cttacgtcgcagtatatgcagcggatggtgaacatgagttccatccgaatgccacaaatg
ggacaagtttacaatcctggcagctactttatgccaacaatcccacaaccccagaggttc
tatgctcccgcacaaatgggactgcgtccttcgccaaggtggccaacagctcaggcccgc
cctgcggggcaagttccagccttcgcaatgcagccaccattccgcgctcctcgtggagca
gttgctggtgctggacagcctctgcgagctcttggacgaatgccaggaccacaaaacgtt
ccaggtggcccacaaccaagagcaattggcaatggtccacaacaaatggccgccgctgct
gctgctgctgcaggtcaacaaccccgcggcccaacgacccaagcaccacctgcatacaag
taccagtcgtctgctatgcgtactccaggacaaccctccggagtggtcatcacaggacaa
gaaccgttgtcggcttcggcattggctgctgctcatcccaacgaccaaaaacaaatgcta
ggagaacgattgttcccactcattcatgaaaagtatccaactgtcgctggaaaaatcact
ggaatgttgttggagatggacaactctgaaatcttgcatttgttggacgatcgcgacttg
ctgagctctcgggtcgaagaagctgttgcggtcttgcagatgcaccaaaccaagcaacct
tcgatgcctcaacagccaactgcggctgccaactaa
DBGET
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