Folsomia candida: 110848421
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Entry
110848421 CDS
T05043
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
fcd
Folsomia candida
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcd03041
]
110848421
Enzymes [BR:
fcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110848421
Spliceosome [BR:
fcd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110848421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_C
DEAD
R3H
OB_NTP_bind
AAA_19
HA2_N
AAA_22
nSTAND3
ATPase
AAA_16
Ank_2
PhoH
Ank
TsaE
Motif
Other DBs
NCBI-GeneID:
110848421
NCBI-ProteinID:
XP_021951330
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MEDNKKKGNMRRLQAISDKVPEAEKIKLDTVIDRFRNNFGIRDLTFPNTLSSHERAYIHS
KAGQFGINSQSFGAGETRKLTLSKSMKNNKVIKTLELDMMSITLIHMLEPSSFGYDLPPV
EVFQNISNTLDDSTRRNYHRSTERSGFTNRLFTAPPPKIPKRRLHYQFEHSRRELPIWNF
QGKILQAIRQHNVIFIKGDTGCGKTTQVPQFILDDAMARREKVRIVCTVPRRIAAVTISD
RVATERGERVGKTVGFQIRLESKISPCETILTYCTSGILLRSLTSFEYSVLRTTTHIIID
EVHERDRQTEFLLACLRDVGKQFPNLKIILMGADMNTNLLVSYFGGETQCPLIQVHGRLY
PVKLHYLEDVLTLLQKENDKKRQREQQRPISSRNRNSIVDNLVNTLKYPTTRREANDFGS
GSAVSLGNTNFFDNPPTNEFMPFNAEENEVDLEAIKNELDSKIMKVWIGGDKDNLSVENF
LNLVDNSQVLSIDYRHSITNTTMLMAYSVQGRLDCVEKLLSRGADPKLSMILEDGRSYTA
KDWASDHGQMEVVQIITQYEFTLAIIATTNSIELEPSVQERLDRYQISHSDERVDLQLIV
DLLYYINQNSAPKDAVLIFLPGYEEIVTLKQMIFTDHNLGNFSHDFVVFLLHSNIQTGDQ
RAVFEPPKPGKRKIVLSTNIAETSLTIGDIIYVIDSGKGKEKTFDAMTGVTQLRSQWISK
ASANQRAGRAGRCQPGLCIRLYSSTRYQSMNDYPEAEIVRSSLQEMCIYTRSFIRTSLKI
QDFFTRLPEPPAPIAVKKSIESLIAMGALDENEQLTKLGFSLLDFPIEPYLGKALMYAVA
LKCIDPILTIITIMSHREPFQLPLNPDEKKKAIGSKFEFSAGSLSDHMSSLKAFQDWEKS
TLFNDNVQRSFCRDRYLSAACFEMIYGIRSQLLGQLRAAGFVQNCGANDLKDLNTNSENW
PLVKGILTGILYPNICYMDKRNKTLFNEYDTKIRYHNASVLGTTRKDAIANLPGDWVIYD
EISQQDFSKSIRTCTLVGDVPLVLFGGNFSTQPVATDDEQYDDGDLLEAGASNRVIMKRF
DLNNWITFCGTENVVTAILYLKKRLNELVIKRLQFPSLAYTVEEESVVRIVAEILSAEDQ
KLGFQQISGIGQWPKLVSGNLMSTPSSGYEQSSTLYVGNTP
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaataagaagaaaggtaatatgcggcgcctccaagctatcagcgataaggtt
ccggaggcagagaaaatcaagttggacacagtgattgaccggtttcgtaataactttggt
atccgagatttaacgtttccaaatactctgtcaagtcatgaacgtgcatatattcattca
aaagctggacagtttggaataaactcccagagttttggagccggtgaaacaagaaaactt
acgcttagcaaatcaatgaagaacaacaaggtcataaaaactttggaattggacatgatg
tcaattactttgatccacatgctggaaccgtcaagctttggatacgatcttccaccggtg
gaagtttttcagaatattagcaatacattggatgacagtactcgcagaaattatcaccgt
tcaaccgaaaggagtggatttaccaatcgtctgtttactgctcctcctccaaaaattcca
aaacgacgcttgcattatcaatttgaacatagtaggagagaattgccaatttggaacttt
cagggcaaaattcttcaagctattcgccaacacaatgtcatttttatcaaaggagacact
ggttgcggcaaaactacacaagtaccccaattcattcttgatgacgcaatggcccgacga
gaaaaagtacgaatagtttgcacagtaccaagaagaattgcggctgtaactatcagtgat
agagttgcaacagaacgcggtgagcgcgttggaaaaactgttggatttcaaattcgattg
gagagcaaaatttcaccctgtgaaacgattcttacatactgcaccagtggaattctcctg
aggtccttaacttcatttgaatacagcgttttgaggaccacaacccacattatcattgat
gaagttcatgagcgtgatcgtcaaacggagtttctactggcatgtttacgtgacgtagga
aaacagtttccaaacctcaagataattctaatgggtgctgatatgaatacaaacttgttg
gtttcctactttggaggagagacacaatgtccactgattcaagtacatggacgtctgtac
ccggtcaagctacattacttggaggatgttttgaccttgttacagaaggaaaatgataaa
aagcgtcaacgagaacaacaacgacctataagctcaagaaatcgaaattcgattgtagat
aatcttgtcaatactctgaaatatccaacgacgagaagagaagctaacgattttggtagc
ggaagcgccgtatccttgggcaataccaacttttttgacaatcctcctacaaacgaattc
atgcctttcaacgctgaagaaaatgaagtggatttagaggccataaagaacgagttggat
tccaaaataatgaaagtctggattggtggggataaggataatttgtccgtagaaaatttt
ttgaatctggtcgacaatagtcaagtattatccattgattaccgacacagtattaccaac
actacgatgctgatggcttattcagttcaagggcgtctggactgtgttgaaaagttatta
tcaagaggtgcagaccccaaactatcaatgattcttgaagatggtcgttcttatactgcc
aaggattgggcatcggatcacggacagatggaagttgttcagataattactcaatatgaa
tttactctagcaattatagctacgacaaactcgattgagctagaaccaagtgttcaagaa
agactggacagatatcaaattagtcacagcgatgaacgagtggatttgcagcttattgtg
gatcttctctactatattaaccaaaacagtgcacctaaggatgccgtcctcatttttctt
ccgggttatgaagaaatcgtcactttgaaacaaatgattttcacggatcacaatttggga
aatttctcgcatgattttgttgtattcttactgcattccaacattcaaactggcgatcaa
cgtgccgtatttgaaccccccaaacctggaaagaggaaaattgtattgtcgacaaatatt
gcagaaacaagtttgacaattggagatatcatttacgtgattgattctggaaaaggaaaa
gaaaaaacgttcgacgcgatgactggcgtgactcaactcagatctcaatggatctctaag
gcgtctgctaatcaaagggcaggtcgagctggaaggtgtcaacctgggttgtgcatccgc
ttatactcgagcactcgataccaaagtatgaatgactatcctgaggctgaaattgttcga
tcatctcttcaagagatgtgcatctacactaggtctttcattcggaccagcttgaagatt
caagattttttcacgagactacctgaaccaccagcaccaatcgctgtgaaaaaatctatt
gagtcgttgatagcgatgggagctctcgacgaaaatgaacaattgacaaaactcggattt
tccctattggactttcctattgaaccttatttgggcaaagccttgatgtatgcagtggct
ttaaaatgcattgatcctattctgacaatcattaccatcatgtcacatcgtgaaccattt
caattgccactgaatcccgatgagaaaaagaaagcgattggatcaaaatttgaattctcg
gctggctcgcttagcgatcacatgtcgtccttgaaagcgtttcaggactgggaaaaatcc
acattgttcaatgacaatgtgcagagatcgttttgccgtgaccgttacttgtccgctgca
tgtttcgagatgatatatggtatccgatcccagttacttggacaattgcgagcggctggc
ttcgtgcagaactgtggagccaatgatttgaaagatctcaataccaattctgaaaattgg
ccacttgtgaagggaattcttactggaatactttacccgaatatctgctacatggataag
agaaataagactttgtttaacgaatatgacacaaaaattaggtaccacaatgcgtctgtt
ctcggaacgactagaaaagatgccattgctaaccttcctggtgattgggtcatttatgac
gaaatatctcaacaagatttttcaaaatcaattcgaacttgtacccttgtcggcgatgta
ccccttgtattatttggtgggaatttttcaacccagcccgttgcaaccgacgatgaacaa
tacgacgatggtgatcttcttgaagctggtgcttctaacagggtgattatgaaacgcttt
gatctcaacaactggataacattttgtggaactgaaaatgttgttactgctattttgtac
ctgaaaaaacgtttgaatgaacttgtaattaagcggctacaatttccatcgctcgcatac
acagtggaagaagaaagtgttgtaagaatcgttgcagaaattctctccgcggaagatcag
aaacttggttttcaacaaatatcaggaattggacaatggccgaaattggtatcaggaaac
ttaatgtccaccccaagctctggatatgaacaatcttctacgttgtatgtgggaaacact
ccataa
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