Folsomia candida: 110850304
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Entry
110850304 CDS
T05043
Name
(RefSeq) botryococcus squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
fcd
Folsomia candida
Pathway
fcd00100
Steroid biosynthesis
fcd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
110850304
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
fcd01006
]
110850304
Enzymes [BR:
fcd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
110850304
Prenyltransferases [BR:
fcd01006
]
Terpene biosynthesis
Squalene/phytoene synthase
110850304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
110850304
NCBI-ProteinID:
XP_021953432
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
METVKQKSCKSWITKPREILALRTLIKLKYARDPGQEKDQWCYDMLLNFGEAFGMMCKLL
PSEMQHFLAALYLALRVIDTIEDDVGKSCECRIKDLEGVHNFLKDANYQTSCQYGLNPKE
ITLMQNLPKVRTFYLQLSPVLQTLVDSAVQEMARGMIKFLAKPQDQPLCDTFVDLEEYCY
IVAGIAQKAIFSFLTEEGFELEENVSRLIPGEPGWLTGSISYSIFNQEANIIRDIADDTM
AAKSSRLYWPKELVEKYVAQQSDLVIPANRKVAISCLNELIAHTLTHVVPMLEWLDNLKC
KKAKETMCVFFLKNLATLAILYGNGKTFKYVLKPSVPTLAYLLEISTDFGKILQATKKYC
GVICRKVGPRDVHKGLVLREVYAIMAKCDYLLLKC
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggagacagtcaagcaaaaaagttgcaaatcttggatcacaaaacctcgcgagatactc
gctctccggacactgattaagctgaaatatgctcgagatcctgggcaggagaaggatcag
tggtgttacgacatgttgctcaattttggcgaggcgttcggcatgatgtgcaagttactt
ccgagtgagatgcaacatttcctagctgctctatacctcgccttacgtgtcattgatacg
attgaggacgatgtgggaaagagttgtgagtgcaggattaaagatctcgaaggggtacat
aacttcttaaaggacgccaactaccagacgtcctgccaatatgggctcaaccccaaggaa
attaccctgatgcaaaaccttccaaaagttcgcaccttttacctccagctctcccccgtc
cttcaaacccttgtcgactccgcggtgcaggaaatggcacgagggatgataaagttcctc
gcaaaaccgcaagatcaaccgctttgcgatacctttgtcgacctggaagaatactgctac
atcgtggcggggattgctcaaaaagcgatattttcattcctgacagaggaagggtttgaa
cttgaagaaaacgtgtcacgcctaattccaggagaaccgggttggctgacggggtcaatt
tcgtactcaattttcaaccaggaagccaacattattcgcgacattgctgacgacacgatg
gcggcgaaaagttcgagactttactggccaaaggagcttgtcgaaaaatacgtcgcccag
cagagtgacctcgtcatcccggcgaatcgaaaagttgcgatttcctgtttaaacgagctc
atagcgcacacgctgacccacgtggtcccgatgttggagtggctggataatctaaaatgc
aagaaagccaaggaaaccatgtgcgtcttctttttaaagaatttggccacgctggcgatt
ctttacgggaatgggaaaacttttaagtacgtgttgaaaccgagcgtacctacgttggcg
tatctgctcgaaattagtaccgattttgggaagattttacaggctacgaagaaatattgt
ggtgtgatttgtaggaaggtggggccacgagatgtgcataagggtctcgtgctgagggag
gtttatgcaataatggccaagtgtgattatcttttgttaaagtgttag
DBGET
integrated database retrieval system
