Folsomia candida: 110850860
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Entry
110850860 CDS
T05043
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
fcd
Folsomia candida
Pathway
fcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110850860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110850860
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110850860
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110850860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
110850860
NCBI-ProteinID:
XP_021954142
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MPVDSAAARAARFDVRRKINDEFVANLRHKGLHSLSVWNFVFYCFAGEIDRCLKKVSEGV
ETFEDIWQKVHNATNTNQKEKYEADLKKETKKLRKLRDQIKSWIASGEIKDKSTLVDTRK
LIETQMERFKVVERETKTKAYSKEGLGAAQKLDPTTREREDLNNWLISAVDSMQIQIDSF
ECEIESILAAKKKRLDKHKQDRLDELKTFLERHRFHITKLETLMRMLDNLAADVNEVIKN
NKDDIDYYXESSQEPEFEVNEFIYDDIDGLDDDCLVSQPVGGGTEEKGAEEELPISITTS
SGNNSPSSPVHSSDASDPEKRRKSSDDVSVKVVRPVPAKAVVQSNHSPSPVAGKTVGAVG
TPPKGVGTPNNSSPSSGLSNHVSSLSSLSSSPTHNYHNALNNSKSIGHPDLTEHKDGSSI
TGGLCFRGLSKFSVMDSSIIRGPLGGMSTVNGNGGPIDEDHSSPHTQLLTSCSTPITGSS
LTMENGLISSSPPQETTCSNNNNILLMSSFSSTETSGVNERPSSHSSQQLQLQHQLFGDS
SSLLSSTMESLSNSSSLQQPSSHIQQAFNGLGSVTGAASNLSEGFASNLGVSSNSLISSI
NNSSGSISCSVIGDTSNVIGLPNIIGVSSGGNQQISSTGDHISSALVCDGGDESATTTTS
VAIFSSSSSGGVTMFATSSNTSSSFSASGAGVSSSHNNSNSGILSQQHIHQLQQLQQHQG
PISQCETNLDPNISEYLKVRDQILFNFTMFLIPVLGIMVSLNASFVSKCIQSXSNIPLLD
VAYVSPDVPLQEEHQLQFQMMEAAHQHLPVSADSERMRQILPRNPYPTPLYYPQHPLSNS
DTYEFFNRLSVETLFFIFYYLEGTKAQYLAAKVLKTQCWRFHTKYMMWFQRHEEPKVINE
EYEQGTYVYFDIEKWGQRKKDGFVFEYRYLENRDLR
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgatagtgcagccgcgagggctgctagatttgatgttcgacgtaaaataaat
gacgaatttgtagcgaatttacgacacaaaggacttcatagtttgtcagtatggaatttt
gtattttactgtttcgcaggagaaatagaccgctgtctaaagaaagtatctgaaggagtg
gaaacatttgaggatatttggcaaaaggtccacaatgcgacgaacaccaatcagaaagaa
aaatatgaagctgatctcaaaaaggagaccaagaagctccgaaagcttcgtgatcaaatt
aaatcttggatcgcgtccggtgagattaaagacaaaagtacacttgtcgataccagaaaa
cttattgaaacgcaaatggagcgatttaaggttgtcgaaagagaaactaaaacgaaagcc
tattcaaaggaaggacttggagctgctcaaaaattagaccccacgacgagggagcgagaa
gacctgaacaattggttaatttcagctgttgactcgatgcaaattcaaattgattccttc
gagtgtgaaatcgagtccattttagctgcaaagaaaaagcgcttggataaacataagcaa
gaccgactcgacgaattaaaaaccttcctcgaacgacacaggtttcatataacaaaattg
gaaactctgatgagaatgcttgacaatctagcagcggatgttaatgaggtcatcaaaaac
aacaaagatgacatcgattactacntagagtccagtcaagaacctgaatttgaagtgaat
gaatttatttacgatgatattgacggtctcgatgacgattgtctcgtcagccaaccagtc
ggcggtggtacggaagaaaaaggagcagaagaagagttgccaatatcaattacaacatct
tctgggaacaactcaccaagttcccccgttcattccagtgatgcttcagatcctgaaaag
aggagaaaatcttcagacgacgtctctgtcaaagtcgtcaggcctgttccggcaaaagcg
gtggttcagtcgaatcatagtccaagtcctgtagcaggaaagactgtcggagcggtagga
acaccccccaagggtgtcggtactccaaataattcgtctcccagctcagggttgtccaat
cacgtctcctcgctctcgtctctgtcttcgtcccccactcacaactaccacaatgctctc
aataactctaaatccataggccaccctgatctaacggagcacaaggacggctcttcgatc
acaggtggtttatgttttcggggtttgtccaaattttcagtcatggattccagcataatt
agagggcccttgggtggtatgtcaacagtaaacgggaatgggggtccgattgatgaggat
cattcaagtccacatactcagttattaacatcatgcagtacaccaattactggatccagc
ttaaccatggaaaatgggcttatctcctcttcccctccacaagaaacgacgtgtagtaat
aacaacaacatcttgttaatgtcatccttctcctcgactgagacaagcggtgtgaatgag
cgcccctcctcccactcgtcccaacaattacaactccaacaccaactctttggagactcc
tcatcattattgtcatcgacgatggaatcactttctaactcatcatctcttcagcaacct
tcttcgcacattcagcaagcttttaatggacttggctccgttaccggggcggcgagtaat
ttatctgaaggatttgcgtcaaacctgggtgttagtagtaattccctgattagcagcatt
aacaatagtagtggtagtatttcttgcagtgttattggtgacacgtctaatgtgatcgga
ctacctaacataattggtgtgagtagtggtggtaatcaacaaattagttccactggggat
cacatctccagcgctttagtttgtgatggtggtgacgagagtgcgacgacgacgacctca
gttgctatcttctcctcctcttcgagtggtggtgtgacaatgtttgctacgtcgagtaac
acttctagtagtttcagtgcgagtggtgctggtgtttcctccagtcataataattccaat
tcgggcatcttgtctcagcaacatattcatcagttacaacagctccaacaacaccaaggg
cccatcagtcaatgtgaaaccaacctggacccgaatatttcagaatatctgaaagttcgg
gatcaaattttgtttaacttcacgatgttcttgattccagtgttggggataatggttagt
ttgaatgcttcatttgtctcaaaatgcattcaatcctaatcaaacatccctcttcttgat
gtagcctatgtgagtcctgatgttcctctgcaagaggagcatcaacttcaattccaaatg
atggaagctgcccatcaacaccttcctgtttctgctgatagtgaacgcatgcgtcagatt
ttacccagaaatccgtacccaacgccactctattatccacaacatccattatcaaattct
gatacctatgaatttttcaaccggctatcggtagaaacgttgtttttcatcttttactat
ctggagggaacgaaagcgcagtacttggccgcaaaagttttgaaaacacaatgttggagg
ttccatacaaaatacatgatgtggttccaacgccatgaggaaccaaaagtgattaatgaa
gaatatgaacaggggacatacgtgtatttcgatatagaaaagtggggtcagaggaaaaag
gacggattcgtgttcgaatatcgctatttagagaatagagatttgagataa
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