Folsomia candida: 110851254
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Entry
110851254 CDS
T05043
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
fcd
Folsomia candida
Pathway
fcd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110851254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcd03400
]
110851254
DNA repair and recombination proteins [BR:
fcd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110851254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
Tox-REase-7
Motif
Other DBs
NCBI-GeneID:
110851254
NCBI-ProteinID:
XP_021954650
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MAPPTKPPTTPQSNTLLNYFSRSVTPKTSSTATTSRAEGDNDDTPAGPSPFREESSSKPV
ATEESITPSYAGETPKKSGKKTPLRRRIQRIESESDEENQSPKEEEKVVQSKKKKKAAPS
DESGDDYKPSDDDEEEDEEDEESAETSEPESDDGSGSDDDDKPRSSQSRNKKRNVGGSGI
KRKSVSSPVESSLRKKIKTFSTTSSPVTPTSTKATMKAKTPTGAGKKMASGSQTPGGDGS
DERHPVDGGGSIQWPHLKLEWLKPEKRRDSKKRLMSDPMYDPTTLDVPMSYINEQTPVQR
QWWEMKKSYFDTVLFFKMGKFYELFHMDAVIAVEELDIIFMKGDVAHAGFPEKSYSYRAS
TLINKGYKVARIEQTETPDMMNERLKTDRKKGRSVPKYANVVNREVCQITTRGVRTATAL
DRQYENINPESAYLYSVVAKVASSTSTQQEVTNPTFGVCFIDTTIGEFHVSQFEDDRFFS
RLRTLFSHHVPAQVIVKKGNLPSGVDQLINGYAQVRKEEYNSQIPAAEKIIKTIKEDSYF
YDKASGDIVWPDAFKTLLDSGEMTAEKGWELAVQAFGLITQCLKQFLVDYDLLSLKRFSI
YNPVDSLTISGPNDVKMPTNMVLDGISLQNLDITESSASCFNLLSKVNTCFTPFGKRLLR
QWICTPLAIPEEIESRLDAIQELMSYSTFINRALVLLKGLPDLERLLSKVHLLGSAHRKQ
NHPEGRAIMFEEVTYSKNKISDLLSIINGFKSSKEIIVLLQEHEVQSQFLQNIINRFPNI
GPLLKRFDDAFDHADAVKEGKIIPKDGADSEYDQVQVDLEEVKNESERYLKQITGQLKTR
VSYFGSAKNRFQLEVSDNTKVPREFELSSSKKGYKRYMTAETKEFLDRIQRIETKREEVL
RDITRRVFEKFDKSHDTWKVAISCIAELDAIISLKTFSESQEEMCRPKVVFSRKPFFKLK
NGRHPCMAVESYIANSCYLGVSRPNNAPFGCFSLLTGPNMGGKSTLMRQVALIAVLAHMG
CYVPATACEMSIIDRIFTRIGASDNLGDGESTFFVELSEASAILRHCTKDSLVLMDELGR
GTATYDGTAIAHAVATKLANDGVRTLFSTHYHTLVESIQHLPMIQLGHMACMVENENEED
PTQETVTFLYKIAPGPCPKSYGFNAAKLAGMPDEVIRDGHLKAKEFETITSNVTTFRQII
GEDKLSLQNAMQILKI
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcaccccctaccaaaccccccaccacgccgcagtccaacacattgttgaattacttc
agtcgttccgttacgccgaaaacatccagcactgcgactactagccgggcagagggtgat
aatgacgacacaccggctggtccttcgccctttcgggaagaatcctcatccaagccggtt
gctacagaagagtcgataactccttcgtatgctggagagactcctaaaaagtctggaaag
aagactcctctacgcagacggatccaacgtatcgaatcagagtcggatgaagagaatcaa
tctcccaaagaggaggagaaggtcgttcagtctaaaaagaagaaaaaggctgccccatcc
gatgagagtggagatgattataaaccgtccgatgatgatgaggaggaggatgaagaggat
gaagaatcagccgagacgtccgaaccagaaagtgacgatggatctggatcagatgatgac
gataaaccacgttcatcgcagtcgcgaaacaaaaagaggaatgtcgggggaagtggaatc
aagagaaagtcggtgagttctccagtggagtcttctctcaggaagaaaatcaaaacattc
tccacaaccagcagtcctgtaaccccgactagtaccaaagcgacgatgaaagcgaaaact
ccgacaggagcaggcaagaaaatggcttcggggtcacaaactcctggcggcgacggcagc
gatgaaagacatcccgttgatggtggtggatctattcaatggccacatttgaaattggag
tggctgaaaccggagaaacgccgagattcaaaaaaacgtctcatgtctgatcccatgtat
gatcccaccacgctggatgttcctatgagctatatcaatgaacaaactccggtgcaacga
caatggtgggaaatgaaaaagagctattttgatactgttttgttctttaaaatgggaaag
ttttatgaactattccacatggatgctgtaatcgcagttgaagaactggacataattttc
atgaagggagacgttgcacatgcgggatttcctgaaaagtcatactcctatagagcatca
acattgattaataaaggttacaaagttgcacggattgagcaaactgaaactccggacatg
atgaatgagagattgaagactgacaggaaaaagggtagaagcgtaccaaagtatgctaac
gttgtaaatcgagaagtttgccaaatcactactcgtggagttcgaaccgcaacagctcta
gatcgccaatatgaaaatatcaatccagagtcggcatacttgtacagcgtggttgcaaag
gtcgctagtagtacttctactcaacaggaagttacaaacccaaccttcggagtatgcttt
atcgacacaactatcggagaatttcatgtctctcaattcgaagatgatcgcttcttttcg
cgtttgcgaactctattttctcatcatgttcctgctcaggttatagtgaagaagggaaat
cttccaagcggagttgaccaattaatcaatggctacgcccaagtacggaaagaggagtac
aattcacaaattccggcggctgaaaagattatcaaaactataaaagaggatagttatttt
tacgataaggcttctggagacattgtttggcctgatgccttcaagacactgcttgattct
ggagaaatgactgcagaaaaaggttgggaacttgccgttcaggcttttggacttatcaca
caatgtctgaaacagttcttggttgattatgacttgctgtcactcaaacgattttccatt
tacaatccggtggattctttaacaatttctggacctaatgatgtcaaaatgccaaccaat
atggtattggatggaatttcactacagaatttggacattacagaaagttctgcttcttgt
ttcaatttgctgtcgaaagtcaacacgtgcttcacaccgtttggtaaacgtttactccgt
caatggatttgtaccccactcgccattcctgaagaaattgagagtcgcttagatgcaatt
caagagcttatgagttacagcacttttataaatcgtgcactagttttactcaaaggcctt
cctgacttggaacgattactcagcaaggtccacttgcttggaagcgctcaccgaaagcaa
aatcatcccgaaggacgagcaatcatgtttgaagaagtaacttactcgaaaaacaaaatc
tctgatttgctttccatcattaatggattcaaatcgtcaaaagaaattattgtcttgctg
caagaacatgaggttcaaagtcagtttcttcaaaacatcataaatcgttttcccaacata
ggtcctctcttgaaacgctttgacgacgctttcgatcatgctgatgctgtaaaggaagga
aagattattcctaaagacggtgctgattctgaatacgaccaggtgcaggttgatttggaa
gaagtaaagaatgaatcagaacgttatttgaagcaaataactggtcagttgaagacgcgc
gtatcatacttcggatcagctaaaaaccgctttcagttggaagtatctgacaacactaaa
gtacccagggaattcgaactgagttcatcaaaaaagggttacaagcgttacatgactgct
gaaacaaaggagtttttggatcgaattcaacgaattgaaactaaacgagaggaagtactg
cgagatattactcgaagagtttttgaaaaatttgacaagagccacgacacgtggaaggtt
gcaatttcttgtattgccgagttagatgcaatcatatctttaaagacattttccgagtca
caagaagaaatgtgtcgaccgaaagtggttttcagtcgcaagccatttttcaagctcaag
aacggaagacatccctgcatggctgtggagtcatatatcgccaattcgtgttacttggga
gtctcacgcccaaacaatgctccttttggatgcttttctttgttgactggacctaatatg
ggtggaaaatctactcttatgcgacaagtggctcttattgctgttttggctcatatggga
tgctacgttcctgctactgcatgcgaaatgagcatcattgaccgcatattcacacgcata
ggagcatctgacaatctcggagatggagaaagtactttctttgttgaactgagtgaagcc
agtgctattttgcgtcattgtaccaaagactctttggttctcatggacgaattaggcaga
ggtactgctacttatgatggaaccgcaattgctcatgcagttgctacgaaattggcaaat
gacggggttcgaaccctattctcaacacattatcatacactcgtggaatctattcaacat
ctcccaatgatccaacttggacatatggcatgcatggtggagaatgagaatgaagaagac
cctacgcaagaaaccgttacctttttatacaaaattgcacctggtccatgtccaaagtcg
tacggattcaatgctgcgaaattagctggaatgcctgatgaagttatccgcgatggtcat
cttaaagcgaaggaattcgaaactattaccagcaatgtgaccacatttcgccagattatt
ggagaggacaagttatctcttcaaaatgctatgcaaattttgaagatttaa
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