Folsomia candida: 110851556
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Entry
110851556 CDS
T05043
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
fcd
Folsomia candida
Pathway
fcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110851556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcd03041
]
110851556
03009 Ribosome biogenesis [BR:
fcd03009
]
110851556
Enzymes [BR:
fcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110851556
Spliceosome [BR:
fcd03041
]
Complex A
U1 snRNP components
U1 related factors
110851556
Complex B
110851556
Ribosome biogenesis [BR:
fcd03009
]
Eukaryotic type
Pre-60S particles
Helicases
110851556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
ERCC3_RAD25_C
DUF6505
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110851556
NCBI-ProteinID:
XP_021955085
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MSYRDNRGGRGGYGNGGGSSYGGGAASYGGGGASYGGGGQSYGGGGYSGGGGSYGGGASG
GRGKFAGENLRKVKWEAENLLHFEKNFYVPSPTVLNRPVREVQDYLASNQVTMRGRDLPN
PILHFEEGGIPEGLMSSFRRNGFEKPTLIQSVGWPIALSGRDMVGIAQTGSGKTLAYTLP
SIIHISHQPRLERGQGPIALILAPTRELAQQIQQVAAEYGNACRLRSTCVFGGAPKGGQA
RDLEKGVEILVATPGRLIDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIVDQVRP
DRQTLMWSATWPKEVRTMAEDFLKDYAQVNVGSANLSANHNILQIIDVCQEHEKENKLRM
LIDEIGLEKENKTIVFVETKKKVDEITRTLRKNGWPAMCIHGDKSQGERDWVLQEFRCGR
APILVATDVAARGLDVEDVKFVINYDFPNGTEDYVHRIGRTGRSSKTGTAYTFFTRSNAK
AAKDLVDVLTEAKQVVNPKLFELVGRGGGGYNNSRWRQPGGRGGGGGRGGYRGGSGFEY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacagggataatcgtggcggacgaggcggctatggaaacggcgggggctctagt
tacggtggtggggccgccagttacggtggtgggggtgctagttacggcggtgggggacaa
agttatggaggcggtggatatagcgggggtggtggtagttatggtgggggtgctagtggt
ggacgaggcaagtttgctggagaaaatttgcgtaaagtgaaatgggaggctgagaatctc
ctgcatttcgagaagaacttttatgttcctagtccaactgtgttaaaccgacccgtgaga
gaggtgcaagactatctggcttcgaaccaagtgaccatgagaggtcgagacctgccgaat
cctattttgcattttgaagaagggggaattccagagggacttatgagttcgttccgtcga
aatggatttgagaaaccaactctgatccaaagtgtgggatggccaattgctctgagtggt
cgtgatatggtgggtattgcccaaactggttctggaaagactttggcttacactctgcca
agcatcatccatatcagtcaccagccacgacttgagcgtggtcaaggacccattgcttta
attcttgccccaactcgagagctggcccagcagattcagcaggtcgcagccgagtatgga
aatgcttgccgacttcgtagtacttgcgtcttcggaggcgctccaaagggtggacaagcc
agggatttggaaaaaggagtcgaaattttggtagctactcctggacgtcttatcgacttt
ctcgaatctggaaggaccaatttaaaacgatgcacatacttggtgctggatgaagctgat
cgtatgttggacatgggtttcgagccacaaattcgtaaaattgtggaccaagttcggccc
gatcgtcaaactcttatgtggtcagctacttggcccaaggaggttcgcactatggctgag
gatttcctcaaggattacgcccaggttaatgttggctccgcaaacttgtcagccaaccac
aacattctgcaaattattgacgtttgccaagagcacgagaaggaaaataagctgcgaatg
ctcattgacgaaatcggtttagaaaaggaaaacaagacaatcgttttcgtagagacaaaa
aagaaggtcgatgaaatcactcgaactttgagaaagaatgggtggcctgccatgtgcatt
catggtgataagtcacaaggcgagcgtgattgggtactgcaagagttccgctgtggacgc
gctccaatccttgttgcaactgatgtagcagctcgcggcttggatgttgaggatgtaaaa
tttgttatcaactacgatttccccaacgggacggaagactacgttcatcgcattggacga
actggtcgctcatcaaaaactggcactgcgtatacattctttactcggagcaacgccaag
gcggcaaaggatctcgttgacgtattgactgaagcgaaacaggttgtgaatcccaaattg
tttgagctagtgggccgcggaggaggtggatataataatagtcgttggcgtcaacctgga
ggacgaggtggtggtggaggccgaggtggttacagaggcggaagcggattcgagtattaa
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