Folsomia candida: 110851566
Help
Entry
110851566 CDS
T05043
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
fcd
Folsomia candida
Pathway
fcd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110851566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110851566
03036 Chromosome and associated proteins [BR:
fcd03036
]
110851566
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110851566
Chromosome and associated proteins [BR:
fcd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110851566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
110851566
NCBI-ProteinID:
XP_021955104
LinkDB
All DBs
Position
Unknown
AA seq
1702 aa
AA seq
DB search
MFGGGNFGSNTPTFGGGAFPNTTTNTSVFGQPQQQPQVSTSLFGGGGFNQPKATFGSTFG
SPQSSTMFGQQNRLTAPTTGGLFSGQTATVSPFSATGQTMGQTQVPAGTSFPFTPISGSD
TMMKNGQASPISTRHQCITCMKEYENKSLEELRLEDYQLNRKGPQQGVMFGSTQPQQQQS
TGLFSSFGSSATTTPFGQTSTFGAAATSTPSSGWMFNSLNQPKPQTGSFFSQPTAPVTST
TFGASPAFSFTNQTSQPASVFGANNTTVSTGGLGQTSTFTFGQPQAQTQSTGIFGQKPMT
SAPSTAFGGGFGASAFTNTSTANKPTLGFSGFGTSTAPTFGTTTTNFGTGTSSGGMFGFQ
NQTQNKPFSFSTPFATQSQAQPTQPTFGAPSTGFSFNTAATTAPTMGFGTSASTFGGLGN
TMNSFSTPTFGSTQPSLGFGFGQNTTTTPGFSSFTPATMFSPAVQQQQNTPQPGAYGFAT
TPYKDSPLFYNLIANRDFDNMVKPTSAAAQRAIKEASRRRTSTSLSFSFPAQVSKNVTYP
SPQSFSKHAIFDGFEDEEDKGFSIDILSPKTMVKKLTLKSLKNSLTPNHRQSISFSTSPH
LGENGFVNDSADASLLDLNTSRGGSDTQSAASENDSPTKYRDEDYVELSGERAGVPVQLI
QKRRSGTESLLVGMGGGDNNAYEEHKCRVVNTRAGYYIEPPIETLEKCVDDQGNCFVKGL
VIGRLGHGEIRYIDVVNVAGVNIDEIVHFRHKEVVVYPDDSNKPPVGSGLNCPAFVCLDR
VWPIDKATKDPIKYPLQLQNMGYENSLRRSCSRLGAEFISYVPETGVWTFKVPHFSKYSC
DVEEAETDTTDVQSSQPPIKGLGGVLMQINQYVPTSKTLSSHQQSSPRFESLLNEGKQLQ
QQQQTKLQQMDIEDDCLPLIRNQVARQSTPVIPMATDDFGYSISNVEHNPLTPTDSNDSE
SDWVPDDLFSGKGQYESVLQGTSETSAVRMMKSALMFTELAHDKDTEIQPPTKKFRSPLL
RSKSMAGQTIAINISDADRRKSLLELKQRRPGPPIKTLVTLKEQDEVVSPFGTDHVTSIT
RRHEVSKRFPENILFSKLSLHTTNGNRYIATPRVTFGPLGTFMTVTNSSKMGSWVNVKKI
KSYMDLSMDATTIQLLEKQLSKQMARAEPQPEDQIHVLQSFCLQNELHPTAKDAQREVMM
WELFQMLWPRSEEEGLPPVLETRDNVSKWLSKYCEDLFSQTLGKNAQISVLGLLKMGRRE
EACMLAVKNRNPYLALLMSQAALVKASASNCKEQLDVWQDEGALDLLSKNTVNIYRLCAG
DILLDSIDISKMTTSEWLQHFAIYLWYCCPPQVSIKEALASFQQLLKYELVQRTGWIEEE
ISRVAFPSVCDSSLPNLCVQLLKLYCFEGYPLRSILDPDTYSEDCLDYKLAWLLMVHLRP
RNFQIYEDHFSSIATSFSYQLEQVGLYPWAVFVTSRTQDRALYHNTLVERNLGTWGTVEH
ERFLLENSLLRQPQFLFNSRVTRESKEDNREYGGIWYLLKSGNVQKSFDELEKFFNVEIM
KSSDIVDSLLELIKLMKPFSNEIRNWNTRGWFMLGTLELLQIRKSYENRGRAKFLPNLTD
AEFYKLISLFLKSFAQYKPMNAQERAVSIELAVLVQKIVAELIINNPELKEKIGVGNVSG
LIHLSVPQDYKNELRYFVNALM
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtggtggaaattttgggagtaacactcccacctttgggggtggggcatttcca
aacactacgaccaacacgagtgtttttggtcagcctcaacaacagccgcaagtgtccacg
tccttatttggaggtggaggcttcaatcagcctaaagctacttttggaagtacttttgga
tctccacagtcgtcaacaatgtttggacaacaaaatcgtctcacagctcccaccacgggg
ggtttgtttagtggtcagactgccactgtgagccctttctctgcaacaggccagacaatg
ggacaaacacaagttcctgccgggacatctttcccattcactcctatcagtggtagtgac
accatgatgaaaaatggtcaggcctcgccaattagtactagacatcagtgcattacgtgc
atgaaggagtatgagaacaaaagtttggaagagctgcggctggaggattaccaactaaat
aggaaaggaccacaacaaggcgtcatgtttggttcaacccagcctcaacagcaacaatcc
actggactgttctcaagcttcggttctagtgctacgacaacgccctttggtcagacaagc
acgtttggtgctgcggcaaccagtactcctagtagtggctggatgttcaactccctcaat
cagccaaaaccccaaacagggagcttcttttcccagccaactgcaccagtaacgtcaact
acctttggggcaagtcctgcattttcatttaccaaccaaaccagtcaaccagcgtcagtt
tttggtgccaacaatactacagtctccactgggggcttgggtcagacgtcaacattcact
tttggacaaccccaagcacagacgcagtctacagggatattcggtcagaagccaatgaca
agtgcgccaagtacagcatttggagggggctttggagccagtgctttcacaaatacttca
actgcaaataagccgactttaggtttctcagggtttggaactagtacagcaccaacgttt
ggaacgacaactaccaattttggcacaggaacgtccagtggtggaatgtttggttttcaa
aatcaaactcaaaataaaccattctctttttccacgccatttgctacccagagtcaagca
caacctacgcagcccactttcggagctccaagtaccggtttctcgttcaatactgctgcc
acaaccgctccaacaatgggatttggaacgtccgcaagtacatttggaggattggggaac
acgatgaattcattttctaccccaacctttggatctacacaaccaagcctcgggtttggt
ttcggccagaatacgacaaccactcctggtttttcttctttcacaccggccaccatgttc
tcgccagcagtgcaacaacaacaaaataccccgcagcctggagcgtatggattcgctacg
actccatacaaggattctccactgttttacaatcttatcgccaacagggattttgacaat
atggtgaaaccaacaagtgcagcagcccaacgagcaattaaagaagcatcccgacgacgg
acttcgactagtctctcattctcatttccggcgcaggtttcaaagaatgtaacctatcca
tctccccagtcattcagcaagcacgcaatattcgacggctttgaagatgaagaagacaaa
gggttcagcattgatatcttatctcctaaaacgatggtgaagaagttgacactgaagtct
ttaaaaaattccttgactccaaaccatcgacagagcatttcattctctacaagcccacac
ttgggagaaaatggattcgtcaatgactctgctgacgcatctctcttagacttaaacaca
agtcgaggaggatcagacactcagagcgcagcatcggaaaacgatagcccaaccaagtac
cgcgacgaagattacgtggagttgtccggcgaacgagccggagtacctgttcaactaatt
cagaagcgacgcagtggcaccgaatccctattagtgggaatgggtggtggtgataataat
gcttatgaggaacataaatgtcgcgttgtaaacacgcgtgccggatactatattgaaccc
ccaattgaaacccttgagaaatgtgtagatgatcaggggaattgctttgtgaagggactt
gtcattggaagattgggccatggagaaattcgttatatcgacgttgtcaatgtggctggt
gtcaatattgatgaaattgtacactttcgtcacaaagaagtcgtagtttatcctgatgat
tcaaataagccaccagttggatcaggattaaactgccctgcgtttgtatgtttggatagg
gtttggccaattgacaaggctaccaaggatccaatcaaatatcctctacagttacaaaac
atgggatatgaaaattccctgcgacgatcttgtagtcgccttggagcagaatttatctcg
tatgttccagagactggcgtatggacatttaaggtgccacacttttctaaatattcctgt
gatgttgaagaggctgaaacagatactactgatgtacaatcatcacaacctccaattaaa
ggacttggtggtgttctgatgcaaattaatcaatacgtcccaacatcaaagactttgtcc
tcccatcagcaaagtagtcctaggttcgaatcacttttgaacgaaggaaagcaattgcaa
cagcaacaacaaacgaagcttcagcaaatggatatagaagatgactgtttgcctttgatt
cgaaaccaagtcgcacgccaatcaacacccgtgattccaatggctacggatgattttggt
tattctatcagcaatgtggaacacaatcctctgacaccgaccgattcaaacgatagcgaa
agtgattgggtgccggatgatctctttagtggaaaaggtcaatatgaatctgtactacaa
ggaacttcggaaacgtctgctgtgcgtatgatgaaatccgccctaatgtttacggaactt
gctcatgataaggataccgaaattcagccaccaaccaaaaagtttcgatcgcctttgctc
agatcaaagtctatggctggccaaactattgcaattaacattagtgatgccgatagaaga
aaatcacttcttgaactcaagcagcgcagacctggtccaccaattaaaactctggtgacc
cttaaagaacaggacgaggtagtcagtcctttcgggactgaccatgtaacgtctattacg
cggcgtcatgaagtttctaaacgtttccctgaaaatattctattttctaaactatcttta
catacgacaaatggaaaccgttatatcgcaacaccaagagtcacttttggcccattggga
acatttatgacagtaaccaattcaagtaaaatgggttcatgggttaatgtcaagaaaatc
aagtcgtacatggaccttagtatggacgccacgacaattcagttgttggaaaaacagctc
tcgaaacagatggcacgtgctgaacctcaacctgaagatcaaattcatgtactgcaaagc
ttttgtcttcaaaatgaacttcatcccacggcaaaggatgcacagcgagaagtaatgatg
tgggaactattccaaatgttgtggccaaggagcgaggaggaaggtctcccacccgttctc
gaaacccgggataatgtgtccaagtggctctccaaatactgtgaggaccttttctcacaa
acccttggaaaaaatgctcaaatatcagtacttggacttttgaaaatgggacgtcgcgag
gaggcatgtatgctggctgttaaaaatcgaaatccgtatttggctttgttgatgagccaa
gccgctctagtaaaggcttcagcctcaaattgcaaagaacaactggacgtgtggcaggat
gaaggcgctttggatttattatccaagaataccgtcaacatttaccgtttatgtgctggg
gacattttattggattccattgacatttcgaaaatgaccacgtcagaatggttgcagcat
ttcgctatctatctctggtactgctgcccccctcaagtgtcaattaaggaagccttggca
tcattccaacagcttttgaagtatgaactcgtccaacgaactggttggattgaagaagaa
ataagtcgtgttgcatttccgtccgtgtgtgactcgtcgcttccaaatttatgtgttcaa
ttgttaaaactctactgttttgagggatacccgctacgaagtatcttggaccctgacaca
tactcggaggattgtttagattataagcttgcatggttgcttatggttcatcttcgtccc
agaaatttccagatttatgaggaccatttttcaagcattgcgacctcattttcatatcaa
ttggaacaagttggattgtatccttgggccgtttttgtgaccagcagaactcaggatcgt
gcactttaccacaacactttggtggagcgtaatcttggtacttggggaacagtggaacat
gaacggtttcttttggaaaactctctccttcgtcaaccacaatttctcttcaattccaga
gtcacgagagaatcaaaggaggacaatagagaatatggcggaatctggtatttgttgaag
tccggaaatgttcaaaagtcatttgacgaacttgaaaagttttttaatgtagagatcatg
aaatcttcagatattgtggattcattactagaattaataaaactgatgaaacctttctct
aatgaaattcgaaactggaacacccgtggatggtttatgttgggtacactggagttgttg
caaataagaaaatcctacgaaaaccgaggaagagccaaatttctacccaatttgacggat
gctgagttttacaaacttatatccttatttctaaagagctttgctcaatacaagcccatg
aacgctcaagaacgggctgtaagcatcgagttggctgttctcgtccagaaaattgttgct
gaactgatcatcaataaccctgaactgaaagagaaaatcggagttgggaatgtgtctgga
ttaattcacctttcagtcccacaagactacaaaaatgagcttcgctatttcgtgaatgct
ttaatgtag
DBGET
integrated database retrieval system
