Folsomia candida: 110852837
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Entry
110852837 CDS
T05043
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
fcd
Folsomia candida
Pathway
fcd04382
Cornified envelope formation
fcd04512
ECM-receptor interaction
fcd04518
Integrin signaling
fcd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110852837
04518 Integrin signaling
110852837
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110852837
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110852837
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcd04147
]
110852837
00536 Glycosaminoglycan binding proteins [BR:
fcd00536
]
110852837
Exosome [BR:
fcd04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
110852837
Glycosaminoglycan binding proteins [BR:
fcd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110852837
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
110852837
NCBI-ProteinID:
XP_021956652
LinkDB
All DBs
Position
Unknown
AA seq
1746 aa
AA seq
DB search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NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgattcggttaaaagtggtgggtggaagggttctattgctcctcttgtttgtggtaccg
tcgggatggacgcgaataaacgagcaaggaggttgcatcggctgcacggttcagccatgt
ttctgtgaaggcgaaaaaggtcttacgggcgagcgtggaattcgtggtcaaagtggagca
gaaggttttccaggcgacataggaccagacggaccttttggacccaagggacaaaagggc
gaccttggtaattctggatcaatgggggagaaaggttatcggggcgacggtggcgttcct
ggcttcgtaggagtcgcaggacgtccagggctccctggaaccgatggcctcgcaggggac
gatggaacagatgggtgtaatggaactgatggtgggtcaggcttccctggtcgacctggt
ggaattggggggcgtggaatgatcggacctcagggtaatcggggtcctcctggtgatgca
ggcgaggggggcatcaattctcccgggtataagggcgattggggggagtctggtcgtcca
ggtagcccgggcttgcaaggacatccaggaatgcatggactaatcggaccacgaggagat
cctggtgacagcggacttcctggaaattttggagactttggacagaaaggagcaaaagga
gagatgaacataattccacctgggccaaagggtgactggggagataccggtgatccaggg
ccgcctggtcctggtagctctgtcgtcccaccggaaatcactttcttacgaggacccaaa
ggagaagttgggattaagggcgagaaaggaagtagtgggcacaggggaccatttggacca
atgggattgagtggcgttccaggaaacccgggtgacaatggtgtcagcggtgatcgcggt
gatgatggtgcgagaggaaaacaaggtcgggaaggtcctgaaggccctgcaggtataaag
ggagccaagggcgctccaggttacgaaggagttccgggattcgaaggaggaaagggagat
tttggagatcctgggagacgtggtcagattggtgatcaaggccctctaggtctaccagga
gagtacaaagaaggcgaagatggtgtcgggtctccaggtccagtcggcgcacagggacca
attggctattcaggtcccaagggtgaatttggtcgacgtggagaaaatggcttcatggga
aatcgtggcccagcaggacccccaggaccagagggaatagctggaaatccaggaaggcct
ggttttacgatgaaaggtgaagttggggattcaggttttccaggtcttcggggccctgct
ggatttgatggcgtccctggagtgtatggaactcagggagcaaaaggctttcctggatta
acaattataggcccaccaggattggatggaattcctgggcgagatggattggacggttta
ccaggagaaagaggagataacggatatcaaggagccaaaggttatccaggcgcaggattc
gacataattggaccccctggacctatggggacaccgggattagatggcgatgtggggtta
cctggtttagacggagttcctggttttcctggtttgaagggaaaaggtggggaaaattgc
ggcccttgtttcgatggatttccgggcctcgctggagagaaaggagaaattggctttcct
ggaattcctggcactgtgggtcttcgaggtttaacaggtgaacgtggctttcctggaccc
cgtggaaaagacggactaccaggctttagaggaatacctggacgacctggatcgttcggt
ttagctggttttcctggagaaaaaggtgtcccaggtgaagtaataatgcccgagacggaa
ctaattataggaccacctggacaaattggcgataagggatatccaggcctagatggtgta
cgtgcattgccagggccccctggccgaccaggagatccgggacccgttggaacaaaggga
acgaaaggcttaatgggagatgctgggctacccggatttgattcccgtccaggaataccg
ggaatacctggacagaaaggagaacccgctgatttctttatcgacaaagaagttctacga
ggagatccaggctatgatggcagacgtggaccaccaggagaattaggcgaggttggattt
caaggcgaacctggggacagtttaggcttcctcgtgatgggagaacacggagatccaggc
ttccctggtcagaagggtctacaaggagatcgtggccttgatggaaatccaggttttgat
gggcaatttggtgacaaaggagaagctggagatcagcgtcctggtatttttggagaaatg
ggaagcaaaggttacgccggaatacctggagatgcagggccacgtggattaaaaggacgc
gcaggaggagatggctttgatggaacccctggccgtcacggtggaaaaggtgaaagaggt
gaccctggaagtggtgtgttatccggagatcctggattacccggatatcgaggccaaaag
ggagagcgtggaatggaaggtcctccaggcttggatggaagagacggtccaacggggtta
gatgggttacagggaatgaagggtgccccaggccaaaatggattcccaggaattaaagga
gaacgtggcgaacctttacccggtcttcctggacttgtcggattaccaggattacctgga
ccggttggattgcctggaatttttggtccatctggacccatgggtggtcaaggacgaaac
ggacaagatggatttcctggcccgaggggagatcgtggaaggcctggagttcgaggtatc
gaaggagacgttggacctgacggaccagatggaagagttggcaggacaggaaatccgggt
ccattcgcagaaaaaggagatcaaggcgacactgggacacctggttatgttggctttaaa
ggtttgcctggaaatcttggatatttgggaagaaaaggtgaaattggagagtggggacct
gttgggttggatgggttgcagggagctcaaggaattaccggtgctcccggagacagaggc
ttccccgggtatcgaggtcagcctggagatgatgctaccttcggaaatgctggcgatata
ggagattcgggatccgttggagaaaaaggctaccctggtcggaacggttatgacggacta
aaaggagagcgtggatcttacggggagtcagttcctggcccaattggaggtgtgggatcg
agaggagatgttggctggccgggaatgaagggcttcatgggagaaattggtttacctggt
gttgctggacccgctggcgagccgggcgacatcggaagagctggttttgccgcattaaat
ggccgaaaaggattcaaagggacgcagggtttcgcagggagtccaggaccgggaccacag
ggactaaaaggaatggacggcgatcctggcctttttggccgaaatggtcttcctggagat
cctgggccaatgggaaaatcaggtctcttcggattagctggcatcaaaggatccgtagga
gatcctggttatatgcaatctgggtttggaggacctcctggagattggggacccaaaggt
gtccgtggggataatggaacacccggattttctggagtcaagggacgcaggggagatcct
ggccgagtaggaccccctggtctggagggatctcctggggccaaaggtcaaaggggtact
actggacccatcggtttaaaagcccctgaagcgctcgcccttgctggggatataggagaa
cctggatcgcctggaaaagttggcagacctggctttcacggacaaaaaggaaaacctgga
gattacgggagaaatgggctgcctggattgcgaatggtcggaccggtgagagtaggacaa
aagggtttgcctggagaggatggattaccgggaggtcagggattcaggggaaaagatggg
ttgcagggaagaccgggtttaatcggaagaaagggaagcattggcgaccctggatttgcg
ggatcaccggctacttcatttactggcgaaccaggcgtcagtggaatccctggaggtcga
gggttcaagggccctcccggtgactctggatttgacgggctaccaggattggatggtctc
aaaggaatgcacggcgatcctggattttctggaagacctggcgcctttggcgagaaggga
gaaaaaggagaggctggagtaccgggatttgtcacagcttattcgaagggtttaccagga
agaccaggtaaccctggtcgacaaggcgcaattggaactccgggcttatctggattaccc
ggtccgtctggcgaactcggccgagatggacgacccggtttacctggcttaagcgggcct
aagggagtcagaggcgatggtgggatagctggtagagaaggaaatgaaggtcgcgtcggt
caattcggagcaaaaggtgaccctgccccacccggaccaccaccaaagtcacgaggttat
tttttcactcgacactctcaaacagttcgggaccctatttgccctacgggaagtacactt
ctctgggctggatactcacttttacatctcaccggagacgggaaagcgcgtgggcaagat
ttgggggcaccgggttcatgtctcgccaaattttcgacgatgccgttcctcttctgtaat
ttgaacaatgtgtgcaattacgcgtcgagaaatgactactcgtactggctctcgtcattc
gaaccactccccatgatgatgatgcccattactggactggaaattaaaaagtatgtgtcg
cgttgtgccgtttgcgaagcaccgtcgaccgttattgccgtccactcacaaaccacggat
gttccagactgtccaaatgggtggtaccaaatgtggaatggctactctttcctcatgcac
acagacgctggggcggaaggaggtggtcagcctttagcatcgccgggttcatgtcttgaa
tttttcaagccgttgcccttcatcgagtgcatcggtcaagggaagtgcaacctcttctcg
tccgctttctcgtactggttggctactattcccgagtcaaagcagttcatgcgcccagaa
cacgaaaccacaaaatcaggcagccacgagaacaggatatcgagatgttctgtgtgcggc
aggaggcgacctgatgaattgactgcggggtcagctcaaccaggatcgcagcagggtagg
agggtatccaacttcgggtag
DBGET
integrated database retrieval system
