Folsomia candida: 110852854
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Entry
110852854 CDS
T05043
Name
(RefSeq) recombination repair protein 1-like
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
fcd
Folsomia candida
Pathway
fcd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110852854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcd03400
]
110852854
Enzymes [BR:
fcd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
110852854
DNA repair and recombination proteins [BR:
fcd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
110852854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
110852854
NCBI-ProteinID:
XP_021956670
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MGRPKRSAAPAADVDTEEMEVDKAAEKARIGREKAKKSYREDSASEDEAVAAAAVIDPKD
KDFSDEDVLSPSESEGGSDWAGDSSGSEYGKKSKKTVAKKGRGSVGRGRGRKAASPAKGK
GRGRGRPPAASSASKNGKKATPAKRGRGGDSDEESESDAETSGSDYGKKKKPAVSISPKK
RGPAAKKSPAAKASPKRKRGAAASSSPSSPPAPRRVGRASASKSYKEMSEDDDIEVSDDD
KPVTKKAKLEPKAKPAAKKAEAKKKAASASEDEEDIEDDVDESMEDEEEDEKKADKKVTT
AKKNGSSTKKEVEKKDTTTEEEDVEEEEEDDDEGDKKKKDTKVDKKDNVAAAAAKNRNNG
HTSPDEEESGDEDDVKFKDDKSPASEENGASVEDDDEDKVDKPALKNKTTTDYSKIDFET
DKKTPKGDEWNYKIACWNIGGIKSWLGKNGLEYLVKEDPDILCLNEVRCGEKTKPEQVSK
LDKYPHLYWSFNSESPGHSGVAIFSKEEAKSVEYGLPENEADSSSDKKLREGFNKEGRLI
TVEFDQFYLINAYVPNSGRAEKSDKYPKGYPPKVANGDRLKFDEFFRNYVKELEKKKSVI
VTGDLNVAHAEIDLANPKTNDRTAGFTKEERDGMTKLLEETTLFDSFRELYPDAKGKYSF
WSYMHNAREKNTGWRLDYFLLSEKLRDSLCDNVMRTEVYGSDHCPIVLFMRN
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcccaaagagatccgctgctccggctgctgatgtcgacacggaagagatggaa
gttgacaaggctgcagagaaggcgcgaattggtcgtgaaaaggcgaaaaagagttataga
gaagactctgcgtcggaagatgaggccgttgccgctgctgctgtgattgatcccaaagat
aaagacttttccgatgaagatgtcctctccccgtctgaatctgaaggagggtctgactgg
gccggggatagttctggtagcgaatatggcaaaaagtccaagaaaacagttgccaagaag
ggtcgtggcagtgtcggtcgtggaaggggacgaaaggcagcttcacctgcgaaagggaaa
ggtcgcggtcgaggccgcccacctgcggcgtcatcagcttctaaaaatgggaagaaagct
acgccagcgaaacgaggccgtggtggtgactccgatgaggagtcagaatcagacgctgaa
acttcaggaagcgattatggtaaaaagaaaaagcctgctgtttcaatttctccaaagaaa
cgcggtcctgcagctaaaaaatcacctgctgctaaagcatctccaaaacgaaaacgtggc
gcagcagcttcttcatcgccgtcatccccaccagctccacgacgtgtaggacgagcctct
gcgtccaaatcctataaagaaatgtccgaagacgacgacattgaagttagtgatgacgac
aagccggtaacaaagaaagccaagttggaacctaaagccaaaccagcagcaaagaaggct
gaagctaagaaaaaagctgcgtctgcttcagaagatgaagaagacatcgaggatgatgtt
gacgagtccatggaagatgaagaagaggacgagaaaaaggcagataaaaaagtgaccact
gccaaaaagaatggttcttcaacaaagaaagaagtggaaaagaaggacactactactgaa
gaagaggatgtcgaagaagaggaagaagacgacgatgaaggtgataagaaaaagaaggat
acaaaagttgacaagaaggataatgtagcagctgcggcagccaagaatcgtaacaacgga
catacatctcctgatgaggaggaatcgggtgatgaggatgatgtaaagttcaaagatgat
aagtcacccgcatccgaagaaaatggtgcgagcgtggaggatgatgacgaagataaagtt
gataagccagcgctgaagaacaagacaaccacagactattcgaaaattgatttcgaaaca
gataagaagactccaaagggggacgaatggaattataagattgcgtgttggaacattggt
ggaataaagtcttggttggggaaaaatggattagaatatttggtgaaggaagacccagac
attttatgtttgaacgaagttcggtgcggggaaaaaacgaagccggagcaggtgtcgaaa
cttgacaaatatccgcatctctactggtcgtttaattcagagagtccgggtcattctgga
gttgctatcttctccaaggaagaggcaaaaagtgtggaatacggactaccagaaaatgag
gcagattctagcagtgataagaaactaagggagggattcaacaaggagggtcgtctcata
actgtggaatttgaccaattctacttaatcaatgcctacgttccaaattccggtcgagcc
gagaagagcgataagtacccgaaaggttaccctcccaaagtggcgaatggagatcgattg
aaatttgacgagtttttcagaaactatgtcaaagaattggaaaagaagaaatctgtcatc
gttactggcgacttgaatgtggctcatgccgaaattgatttggctaacccaaaaaccaac
gaccgtacggccggctttactaaggaggaacgtgatgggatgaccaaactgcttgaggag
acgactttgtttgattcattccgtgagttatatcctgacgcaaagggcaagtactccttc
tggagctatatgcacaatgctcgagagaaaaataccggctggcgactcgactactttttg
ttgtctgaaaaacttcgcgactccctctgcgacaacgtcatgcggacggaagtttatggc
tcggatcattgtcccatcgtgttattcatgcgaaattaa
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