Folsomia candida: 110854389
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Entry
110854389 CDS
T05043
Name
(RefSeq) ATP-dependent RNA helicase WM6-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
3.6.4.13
]
Organism
fcd
Folsomia candida
Pathway
fcd03013
Nucleocytoplasmic transport
fcd03015
mRNA surveillance pathway
fcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110854389
09122 Translation
03013 Nucleocytoplasmic transport
110854389
03015 mRNA surveillance pathway
110854389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110854389
03041 Spliceosome [BR:
fcd03041
]
110854389
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110854389
Spliceosome [BR:
fcd03041
]
Complex C
Other components
EJC/TREX
110854389
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110854389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas9_PI
Motif
Other DBs
NCBI-GeneID:
110854389
NCBI-ProteinID:
XP_021958515
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MADNDDLLDYEEEENAEQTTVTEAADGVVANKKEVKGTYVSIHSSGFRDFLLKPEILRAI
IDCGFEHPSEVQHECIPQAVLGIDILCQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMC
HTRELAFQISKEYERFSKYMPNTKVGVFFGGLPMATNEATLKNNCPHIVVGTPGRILALI
KAKKLSLKNVKQFILDECDKMLEALDMRRDVQEIFRNTPHEKQVMMFSATLSKEIRPVCK
KFMQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFDLLDALEFNQVVIFVKSVQRC
MALAQLLVEQNFPAIAIHRGMTQEDRLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVF
NYDMPEDTDTYLHRVARAGRFGTKGLAITFASDENDTKILNEVQNRFDVNITELPDEIDL
SSYIEGR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacgatgaccttttagactacgaggaggaggaaaatgctgaacaaaccacg
gtgaccgaggcagctgatggggtcgtggcgaataaaaaagaggtcaagggtacttatgtc
tccatccattcttccggattcagggattttcttctcaaacctgaaatcctaagggctata
atagattgtggttttgaacatccgtcagaagtccagcacgagtgtattccacaagccgtg
ttgggaatcgatattctttgccaggcaaaatccggtatgggaaaaactgcagtgtttgtc
ttggctactcttcaacagttggaacccgtcgatggacaagtttctgttctcgtcatgtgt
cacacaagagagttggcgtttcaaatatccaaagagtacgagcgtttctccaaatacatg
cccaacacaaaggttggtgtatttttcggaggactcccaatggctacaaatgaagctaca
ttgaagaacaattgtccccacattgtggttggaacccctggaagaattctggcgttgatt
aaggcgaaaaagttatctttgaagaatgtgaaacagtttattcttgatgagtgcgataag
atgttggaggcacttgatatgcgtcgcgacgttcaggaaatcttccgaaacacgcctcac
gagaagcaagttatgatgttctccgctactctcagcaaagagattcgacccgtgtgcaag
aagtttatgcaagaccccatggaagtttatgtcgatgatgaagccaagttgacccttcat
ggactccaacaacattacgtgaagcttaaggaaaatgagaagaacaaaaagttgtttgat
cttttggatgcattggaattcaaccaggttgtaattttcgtcaagtcggtacaaagatgc
atggctcttgcccaactcttggtggagcagaattttccagccattgcaattcatcgtgga
atgacacaagaggaccgtctttcaagataccagcagttcaaggatttccaaaagaggata
cttgttgcaaccaacttgtttggacgaggaatggatatcgagcgagttaacatcgtcttc
aactacgacatgccagaagatacggatacgtatttgcatcgtgttgctcgagctggacga
tttggcaccaagggattggcaatcacttttgccagtgatgaaaatgatacaaagattctt
aatgaggttcaaaaccggttcgacgttaacatcacggaattaccagatgaaattgatctc
tcttcatacattgagggccgttaa
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integrated database retrieval system
