Folsomia candida: 110856361
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Entry
110856361 CDS
T05043
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
fcd
Folsomia candida
Pathway
fcd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110856361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110856361
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110856361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
HBS1_N
Motif
Other DBs
NCBI-GeneID:
110856361
NCBI-ProteinID:
XP_021960541
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MSRHRNVRTMNYDDDYEGYNDVYGHSLDDDYGVSPSASQYLYDRNSRQTQLSHFVGHEND
IVEESEEHAEPPTESVDKRLEKARRRLDSLSIESAVAKLGADEEIRLKHCLETIRDICGD
SVTDNIMKAHIIQANFNSEKALDNILSGVELDPAAVLPEDLWKKHKQDSEPSAKPPIAGP
PQITVKPPAFFKKPELIKVIPASKAAVTLGFNVPAKEKDRGSSPLTLQVVDSRSGSKCAS
PSTTRNTKTSKKKEVEFKGEIAVDQYSKERGSGKDLLNLLVIGHVDAGKSTLMGHLLFQM
GQVPKKSMHKFEQESKKIGKQSFKYAWVLDETGEERSRGITMDVGQSKFETESRTIVLLD
APGHKDFIPNMITGASQADVAVLVVDSTNGEFETGFECGGQTREHAFLVRSLGVNQLIIA
VNKLDNVSWSKSRFDEIHAKLNTFLTKQAGFKESDLTYVPCSGLVGENLSTRSTEPLLTT
WFNGPSLLEAINSLRPPERPVGKPLRITVNDVFKGTGGLCVSGRVETGMVQAGDKIMIQP
VGEIVNVKSITLDEGLGNKAFAGDPVLLSLQGYSDMNVVSIGCVLSDPNFPCKIATKLQA
RIVTFDAMAVPLIKGFTGVMHIGTISEQVTVTRLISQLNKGTGEVIKARPRCLPKNSNGI
IELEALRCVCLEEFKDVKELGRFTLRSSGITIAAGVISQIL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcacagaaatgtccgaactatgaattatgacgacgattatgaagggtataat
gacgtgtacggtcattctctcgacgatgactatggtgttagtccaagtgcctctcaatat
ttgtacgatcggaattcaagacagacgcaactgtctcactttgttggtcacgaaaacgat
attgttgaagagtcagaggaacatgctgaacctccgacagaatccgtggataagaggcta
gaaaaggcgagacggcggctcgactccttgtcaattgagtcggcagtggccaaattggga
gcagatgaagaaatcaggctgaagcattgcttggaaacaatacgagatatttgcggggat
tcggtcacggataacatcatgaaagcgcacattattcaagccaattttaattcagaaaag
gccttggataacatattgagtggagtggaactggatcctgctgctgtgctgccggaagat
ttatggaagaagcataaacaagattcagaaccttctgcaaaaccaccaattgcaggtcca
ccccaaatcactgtgaaaccaccagcattctttaagaaacccgaactaattaaagtaatc
cctgcatccaaagctgcggtgactctgggattcaatgtgcctgctaaagagaaagacagg
ggcagctccccacttaccctccaagttgttgactctagaagtgggagtaaatgcgcttct
ccgtctacaacaaggaacaccaagacgtcaaagaaaaaggaagtggaattcaaaggtgaa
attgctgtggaccagtattccaaagaaagggggagcggaaaagatttactcaatttactt
gtgattggtcacgttgatgctggaaagagcacgctaatgggacatttgctcttccaaatg
gggcaagttccaaagaaatcgatgcacaagtttgaacaagaatcaaagaaaattggaaag
caatcttttaagtacgcctgggtgctggatgaaacaggagaagaaaggtccagaggaatt
acaatggatgttgggcagtcaaaatttgaaactgaatccagaaccatcgtccttttagac
gctccaggacacaaagactttattcccaatatgatcacgggagcatcacaagcagatgtt
gcagtcttggttgtagattcaacaaatggagagtttgagactggctttgagtgtggtgga
cagactcgagaacatgcatttttagtgagatctttgggtgtcaatcagctaatcattgca
gtaaataagttggataacgtcagctggtccaaatcccgatttgacgaaattcatgccaag
ttgaatacatttttgaccaaacaagctgggtttaaagaatcagacttgacgtatgtgcca
tgtagtggcttggttggcgaaaatttatcaacgagatccactgaacctttactaacgact
tggtttaatggcccatcattattggaagccatcaattcgctccgacctccagagaggcca
gttggcaaacctctccgaattacagtcaatgacgtattcaaaggaacagggggtttgtgc
gtcagtggtagagtcgaaaccgggatggttcaggctggagataaaataatgatacaacct
gtaggggaaattgttaatgtaaaaagcattacattggatgaaggtcttgggaacaaggct
tttgcaggagatccagttcttctgtcccttcaaggatacagtgacatgaatgtagtgtcc
attggttgtgttcttagtgatccaaatttcccttgtaaaattgccaccaagttgcaagca
cgaatcgttacatttgatgcgatggctgtaccattgatcaaaggatttacaggagttatg
cacattgggacaataagtgaacaagtcacggtaacgagattgataagccagctgaacaag
ggtacgggagaggtcatcaaagccagaccacggtgcttgccaaaaaattctaacgggatt
attgaactggaagcccttcgctgtgtttgccttgaagaattcaaggatgtaaaagagttg
ggcagattcaccctcaggtcgtctggtattacaattgctgcaggagtcatttctcaaatt
ttgtaa
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