Folsomia candida: 110856657
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Entry
110856657 CDS
T05043
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
fcd
Folsomia candida
Pathway
fcd04512
ECM-receptor interaction
fcd04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110856657
04518 Integrin signaling
110856657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fcd00536
]
110856657
Glycosaminoglycan binding proteins [BR:
fcd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110856657
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
CFC
FnI_RECK
Motif
Other DBs
NCBI-GeneID:
110856657
NCBI-ProteinID:
XP_021960843
LinkDB
All DBs
Position
Unknown
AA seq
1552 aa
AA seq
DB search
MGRLKSKGWCYVCLIVFILCNWISTASAQAEGGGVHHGGRGRNGNGGGGGGGGPGAGSDY
NGGEYNGYEDYDYGEYDETRGVTGGRPATTTTSRPAVAPETGTRREEPSAVTLRTCQFEG
RTYQDGEDWKPDSCAICRCIRGKVECSREGCPGANCDDVECPDIQCATQQYIPLGQCCPI
CADDEDQNGNSSSATPSVPAGPRGGVGSNGPIGMKGDPGIPGSVGIPGEPGNPGPPGPTP
DITPFFNQLSASQGGGEKGPAPDPFQFLQAQVGPVGPRGQPGPPGPSGPQGFQGVRGEPG
DHGPAGATGAIGPRGLIGAPGKDGEPGDDGQAGPPGSSGPPGARGLPGMPGLPGVKGHRG
FPGLDGSKGEQGSGGEKGSLGLPGVPGPQGPMGPGGPRGERGREGPPGNPGLRGIDGVAG
PPGLPGAIGKPGPPGFPGSAGGKGDQGSAGPKGSQGLQGPRGEGGRPGNPGDGGPPGPPG
KDGQPGEKGSPGSIGSPGGQGFPGARGPQGLSGSQGPAGAKGNPGGTGEPGMKGDSGPMG
ENGAPGARGLPGVAGAPGKRGKTGGRGISGPAGPPGERGSPGGRGLPGQDGAPGPKGQAG
ERGPNGVPGLKGAGGEPGRIGPTGLQGLRGPAGRAGLQGKNGAPGERGLPGQDGKNGDQG
QSGAPGLPGPIGPPGDKGLVGDPGKDGEMGGIGQPGPRGDPGKDGSMGMQGPPGLAGPDG
ARGPPGPNGPRGFQGLPGSPGNAGSPGKDGENGLQGPIGAPGSTGGRGERGFPGERGGAG
PPGPPGNRGEPGMMGQDGPPGPNGPKGDKGHAGSPGLLGLPGGRGLPGLPGEKGERGSNG
MMGPAGPPGRGGDQGAVGPVGPVGPPGEPADRGDPGPPGPPGEAGGAGMPGERGLGGPPG
LQGFPGPQGVGGAPGGKGERGLPGLKGEQGGIGNTGKPGEQGLPGLVGLNGAKGGRGEPG
QRGEHGPQGLPGRDGSPGPPGMQGSTGPIGHPGPPGLKGVPGDNGRIGAPGPLGPPGPPG
MEGPKGEGGSEGAQGGVGKPGANGPPGDRGVPGLPGPTGATGGRGPRGAQGEQGIQGKPG
VEGGRGEPGMMGAPGAPGPIGESGPEGSPGKIGPPGIGGRPGDKGPPGPPGMMGLSGGQG
LPGPPGNSGPAGVTGERGPRGESGPQGVEGQAGPRGKAGPPGPQGEKGEKGGGGAKGGKG
HRGLIGLQGLPGQQGESGERGIVGSPGPPGKPGDSGPKGPAGRDGIMGPPGPLGPVGPRG
PPGESGKSGTPGTSGPPGPPGPPGESLGYDAAALAALLNQGTAKGPDPLAGDEPYKILGK
EITQEDRRKLVLTAYEQLITTFEKFQKPAGDKKSPAKTCKDLSVAYPDLKSGEYWVDPNA
GDPKDAILVYCRMEDKATCIHPKPEKSPVMNPIIKTPGEYWISDLEGGSQFTYKSDGTQM
AFLQLLSSTAEQNITYHCFNSAAHYDSQKKNYRSALKLMGWNDLELTARGTRRTRYNVVE
DECRWKKSEWAKTLIQYHTDKAARLPIVDISVKDMGEKSQQFWVEIGRVCFI
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggggagactgaaatctaaaggatggtgctacgtgtgtctaatcgtgttcattttgtgc
aactggatctcaactgcaagtgctcaggccgaggggggcggagttcatcacgggggacgg
ggtagaaacgggaacggtgggggaggtggtggaggtggtcctggtgctggaagtgattac
aacggtggagaatataacggatatgaagattacgactatggcgaatatgacgagacgaga
ggagtgactggcggtcgaccagcgacgacaacaacgtcgagacctgcagtcgcaccggaa
acggggacacggagagaggaaccgagtgccgtcacgttgagaacgtgtcaatttgaggga
cggacttatcaagacggggaagattggaaaccggacagttgcgcgatttgtaggtgtatc
cgtgggaaggtggaatgtagtcgggaaggttgtccaggtgctaattgtgacgatgtggaa
tgtcccgatattcaatgtgctacgcaacagtacatcccgttaggacaatgctgtcccatt
tgtgcggatgatgaagatcaaaatggtaattcgtcgtccgccacgccatccgtgcctgca
ggaccgcgtggaggagtcggatcaaatggaccaattggaatgaaaggagaccctggaatt
cccggatcggttggaattcccggagaacctggaaatcctggaccgcccggaccaacgccg
gatataaccccgttttttaaccaactgtcagcgtctcaaggcggtggggaaaaaggccca
gctccggacccgtttcaatttttacaggcacaagttggacccgtaggtcctcgtggtcag
ccaggtccgccaggtccaagtggtcctcaaggatttcaaggagtccgaggagagccaggt
gatcacggacctgctggtgcaacaggtgcaattggaccaagaggattaattggagcacca
ggaaaagacggagaacctggtgacgacggccaagctggacctcctggatcaagcggacct
ccgggtgcaaggggtctgccagggatgcctgggctaccaggagtcaaaggtcatcgaggt
tttcctggtttggacggttccaaaggtgaacagggcagcggtggagaaaagggaagctta
ggactacctggagttcctggacctcaaggacccatggggcctggtggaccgaggggggaa
cgtggtagagaaggaccccctggaaatcctggattgagaggaattgatggtgtcgccggc
ccacccggtttaccgggtgcaatcggaaaacctggtccccccggatttcctggttccgct
ggaggaaaaggagaccaaggaagcgcaggcccaaaaggatctcaagggttacagggcccc
cgaggagaagggggaagacccggaaatcccggagatggtggtccacctggaccccctgga
aaagatggtcaacctggagaaaagggttcgcctggctcaatcggatctcctggagggcaa
ggattcccaggtgcacggggtccacaaggtttatctggaagtcaaggcccagcgggagca
aaaggaaatcctggcggaactggtgaaccgggaatgaaaggtgactcaggaccgatggga
gaaaacggagccccaggagccaggggtcttcctggcgttgctggagccccaggaaaacga
ggaaaaacgggtggaagagggatttctggaccggctggaccccctggggaaagagggtca
cctggaggaagaggtttaccaggtcaagatggagctcctggaccaaagggacaagcagga
gaaaggggtccgaatggtgttccgggtttaaagggagctgggggcgaaccaggtcgaatt
ggacccactggtcttcagggtttaaggggtcccgcgggacgagcagggctacaagggaaa
aatggagcaccaggagaaagagggttacctggacaagatggcaaaaacggtgatcaaggt
caaagcggagctcccggcttaccaggtcccattggtccacctggtgacaagggtttagtt
ggcgaccctggaaaagatggagaaatgggtggtattggtcaaccaggtccacggggtgac
cctggaaaagatggcagtatgggaatgcaaggaccgcctggtttagccggcccagatggg
gcgagaggacccccaggtccaaatggtcccaggggctttcaaggtctgcccggaagtcca
ggaaatgcaggcagtccaggaaaggatggcgaaaatggtttacaaggcccgattggagct
ccaggttcaactggaggaagaggagaacgaggcttcccaggcgaaaggggtggagcaggt
cctccaggccccccaggaaatcggggcgagcctggaatgatgggtcaagatggaccacct
ggtcccaatggccccaaaggagataagggtcacgccggttctcccggacttttaggtctt
ccaggaggaagaggacttccaggcttgccgggagaaaaaggtgaaaggggttcgaatgga
atgatgggaccggcaggacctcctggccgcggaggagatcagggagcagtgggtccagtt
ggaccggtaggaccacccggcgaacctgcagatcgaggagatcctggccctccaggacct
ccaggtgaggctggtggagctggaatgcctggtgaacgtggactcggaggaccgccaggt
ctgcaaggtttccctggtcctcagggtgttggaggtgcccccggaggtaagggcgaaagg
ggtttgcccggattgaagggagaacaaggtggaatcggaaatacgggaaaacctggagaa
caaggactccctggacttgtcggtttgaatggtgcaaagggaggtcgtggtgaaccagga
cagagaggtgaacatggccctcaaggcttgcctggccgtgatggaagtcctggaccccct
ggaatgcaaggctcaactggcccaatcggacatcctggacctccaggtttgaagggagtg
cctggagataatggacgtatcggagctcctggcccgttaggacctcctggcccacctgga
atggaaggaccaaagggtgaaggcggttctgagggtgcacaaggaggcgtgggaaagcca
ggtgccaatgggccacccggtgatagaggagttcctggcttgcctggccccaccggagcg
acagggggacgtggaccaagaggggcgcaaggagaacagggcattcagggaaaaccagga
gtcgagggtggaagaggtgaaccaggaatgatgggtgcccctggagcaccaggtcccatt
ggtgaatccggaccagagggtagtccaggcaaaataggtcctccggggattggaggtcgt
ccaggagacaaaggccctccaggcccacctggaatgatgggattatctgggggacaagga
ttaccgggacctcctggaaattctggacctgcaggagtaacaggagaaaggggaccgaga
ggagaaagtggtccgcaaggagttgaaggacaagcgggaccacgtggaaaagctggacct
cctggaccacagggcgaaaagggtgaaaagggcggtggtggcgcaaagggtggcaaagga
catcgaggtttaattgggttgcaaggtttacctggtcaacagggtgaaagtggtgagcgt
ggaattgtggggtccccaggacccccgggaaaaccaggagattcaggaccaaagggaccc
gctggtagagatggcataatgggaccaccaggaccgttgggaccggttggaccaagagga
ccgccaggagaaagtggaaaatctggaacgcctggaactagcgggccgccgggtccccca
ggtccacctggagaatcccttggttatgatgctgctgctcttgctgccttgttaaatcaa
ggaaccgctaagggccctgatcctctggctggcgacgaaccttacaaaattcttggaaaa
gaaatcacacaagaagatcgtcgtaaattagttttaaccgcatatgaacagctcataaca
acatttgaaaaattccagaaaccagccggagacaaaaaatctcctgctaaaacttgtaaa
gatttatctgtagcgtatcccgacttgaaatctggagaatactgggtagatccgaatgcg
ggtgaccccaaagatgccattttggtctactgccgcatggaagacaaagccacgtgcatt
catcccaaaccggaaaagtctccagtcatgaatcccatcataaagactccaggagagtat
tggatatctgacttggagggaggatcacaatttacttacaaatcggatggaactcaaatg
gcattcttgcaattgctgtcgtcaactgcggaacaaaatatcacatatcactgctttaac
tcagctgctcattatgactctcaaaagaagaattaccgaagcgcattgaaactcatggga
tggaacgacttggaactgactgccagggggacgaggagaacacgctacaacgtggtcgaa
gatgaatgtcggtggaagaaatccgaatgggccaagacgttaatacaataccacaccgat
aaggccgcccgcctccccatcgtggacatatcagtgaaagacatgggagaaaagagtcag
caattttgggttgaaataggtcgcgtatgttttatctag
DBGET
integrated database retrieval system
