Folsomia candida: 110856675
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Entry
110856675 CDS
T05043
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
fcd
Folsomia candida
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcd03021
]
110856675
03036 Chromosome and associated proteins [BR:
fcd03036
]
110856675
Transcription machinery [BR:
fcd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110856675
Chromosome and associated proteins [BR:
fcd03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110856675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
Tex_central_region
SH2
HHH_3
HHH_9
Spt6_S1
Tex_YqgF
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
110856675
NCBI-ProteinID:
XP_021960864
LinkDB
All DBs
Position
Unknown
AA seq
1874 aa
AA seq
DB search
MSNFIDSEAEESEHEGEEEEEEEIGHVRKYKSKDKRKKQIDSDEEEEDDDEEVVKDLIDD
NPIEEDSDNESAGSRKRKKSDEEDDFDDRLEEDDYDLLEENLGMKVKRKKGFKRIRQDEE
SDVEDTQEQGDDREAIANQLFEGSDNENERPSRRDEAPEQYASDESEVESETDDFIVDDD
GQPIAEKRKKRKPIFTDAALQEAQDIFGVDFDYEDLDKEEEEEYDEEDEEDEDEYENEEQ
HSARRTKKALRRKKKLKSLYELYEPHELERAGITEEDNRIRNTDIPERMQLRVVPITPAD
EDELEEEAEWIFKMGFSKHNFAAIVDKPKVGEITPAPQSDWGDDWDKQSGIAVPGPAASV
VASTVSKPGATSGEEDWEENWEKASSIVSAAPKSTLSAKQGGGVLDEDDNWERESNFEKQ
SVIGGPKSRVGDSDGILPGAKSHISTAASGVPEKSIIQIMEEAKPKVVAKIRKALEFMRN
QHLEVPFIVFYRKEYIQPELKINDLWKIYKLDGRYCQLKLRKTRLSILFKNMQMYQTDLI
MENPDEPISDAIRIITEDDVDRIRNLKTSEELKDMYLLFSLYYADDVQLMKEAMVKKRLE
DKQRAREVAAAAAAEGEPVEDPDDSDSDPIEFPSTKRKIGGGSYALCKKLGIDSLVKKFG
LTPDRFAENLRDSYQRYEVEQYPMDPLDTAKEYMNERLKTQEEALKAAKFMLATQISREP
LVRLSVREVFFERATITVTPTKKGLREIDEAHPCYAMKYIKGKPVRDLKQDQFLKLTMAE
EDKLINLVIGDQIKGITGDTYVEEVVQLFSRDEYSKLVQEWNDVRAECCQFALEKLLYPI
FRKELRAKLLDEAKEYVIDTATHKLNEWLKVAPYSVNFADEDEEDWDTSKGIRVLAIAYV
PDFSQASFATVISPDGEPSEFIRLQNIMKSLKAFNESDRKDKSEDLRSIKELIVAKKPHV
VVIGGESRDAIMIKEDIRNLIADLGTEDGFPAINVEIVDNELAKVYASSIKAQTDFREFP
LILRQAISLGRRIQDPLIEFSQLVNHDDEIMCLRFHPMQDQVAKEELLESLSTQFVNRTN
EVGVDINRCISSPFTMNVAQFICGLGPRKATALVKTLKQNNQRLENRTQLITVCHMGPKI
FINCSGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDANPASAL
EEILETPDRLEELNLDAFAEELERQGFGNKSITLYDIRAELNDRYKDHREHYTTPNAEQL
FNMLTKETPETLYNGKLTTATVVGVSHKKPQGEQLDNAIPVRNEETGMWQCAFCMKNDFP
DLSEVWNHFDAGACPGQATGIRIRLDNGVSGFIPIGKLSDKPVTNPDDRVKRGQTIHCRI
VKIEVDRFSVECTSRTTDLVDGDQKWRLPKDPYYDAEAEDKDKKQEEEVKKKKHYQTYVR
RVIVHPAFKNISFKELIPIMETMDQGDLIIRPSSKGSDHLTVTWKVTDSICQHIDVLETK
KENMFSLGRSLHIGSEEYEDLDEIFARCINPMASLSRELISSKYYVKHLGGSLAMADEYL
KEEKKKNSNKIHYVLHASKEFPGKFVLSYLPGNKVQHEYITVNPSGFRYRQQSFASLNAL
LKWFKEHYREAPPSTPMATPTTNIARASGASAQHGTLVPPPPPSSHFAATLRTTPHYTTP
TQGLTPYSAFTTNTPYTPTAQTPHITPYQTPYQGTPWQSDPQTRALFLHSSDGFKNPGQK
PQANTIRVSRDAQPNDDGSDWRKAADAWAKSQQHRPQRPPDSQRYTDNPNLQPLGSRQHI
SDQALRSSMLQFRQTVEGLRGDQHAHGSSALNFLPNPSPRSGRDSLKSTPRTNFSPRSMV
ESSLGDETPLHDEN
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatttcatcgattccgaggctgaagagtcagagcacgaaggagaggaggaggag
gaggaagagattggacacgtcaggaagtacaagagtaaagacaaacgcaaaaagcaaatt
gacagtgacgaggaggaggaggatgatgatgaagaagtagtgaaagatcttatcgatgat
aatcctatagaggaggacagcgacaatgagtctgctgggtcgcgaaagagaaagaaaagc
gacgaggaggatgactttgacgatcgtttggaagaagatgactacgatcttctcgaggag
aatttgggaatgaaagttaaaaggaaaaaaggctttaagagaattcgacaagatgaagaa
tcggacgttgaagacacacaggaacagggcgatgatcgggaagctattgcgaaccaactc
tttgaaggatctgataatgagaatgagcgcccgtcacgacgagatgaagcaccagaacaa
tacgcttctgacgagtctgaggtggagtcggaaacggatgatttcatcgtagatgatgac
ggtcagcctattgcagaaaagcgaaagaaaagaaagccaatttttactgatgctgccctc
caagaagcccaggacatatttggagttgactttgattatgaggatttggacaaggaagag
gaggaagagtatgatgaagaagatgaggaggacgaggatgagtatgaaaatgaagagcaa
cacagcgcaaggagaacaaagaaagcgttaaggcggaagaagaagcttaaatccttgtac
gaattgtacgaacctcatgaattggaaagagctgggattacggaagaagacaatcgaata
agaaacacggatatcccagaacgtatgcaactccgcgtcgtccccatcactcctgccgac
gaagacgaacttgaggaggaggcagagtggatatttaagatgggtttcagcaagcacaac
tttgcagccatcgtagacaaacccaaagtaggagagattactcctgccccacaatctgat
tggggagatgattgggacaaacagtctggaattgcggttcctggtccagctgccagtgtc
gttgccagcacggtgagcaaaccaggtgcaacttctggggaagaggactgggaggagaat
tgggagaaggcttcctcaattgtctccgctgctccaaaatccacccttagtgctaaacaa
ggaggaggcgtcctagacgaagatgacaattgggagagagaatctaatttcgagaaacag
tccgtcatcggagggccgaagtcgagggttggcgattccgacgggattcttcccggagca
aagtctcatatcagcacggcggcgagtggtgtccctgaaaaatctattattcaaattatg
gaggaagctaaaccaaaagtggtggcaaaaattagaaaagccctcgagttcatgagaaat
cagcacttggaagttccgttcatcgtcttctatcgcaaagagtacatccaaccagaactg
aaaatcaacgatttgtggaaaatttacaagctagacgggcgctattgccaattgaagtta
agaaaaacaaggctaagcatcctgttcaaaaatatgcaaatgtatcagactgatttgata
atggagaatccagatgagccaatttcagatgctattcgaataattaccgaagacgacgtc
gatcgtattcgaaacttaaaaacgtcagaagagttaaaggacatgtatctcctcttcagt
ctctactacgcggacgacgtgcagttaatgaaggaagcgatggtaaagaaacggttggaa
gataaacaacgagcaagagaagtggctgccgcggctgctgcagaaggcgaaccagtcgaa
gatccagacgactctgactcggatcctattgagtttccatcaaccaaacgaaaaattggg
ggcggatcttacgctctatgcaaaaagttgggaattgacagccttgtcaagaaatttgga
ttgactccagacaggtttgctgaaaatttgcgcgactcgtatcaacgatatgaagtggaa
cagtaccccatggacccgctggacacggcaaaagaatatatgaacgaaagactgaaaact
caggaggaggcattgaaagcggcaaagttcatgttggcgacgcaaatatctagagaacca
ttggtcaggttgagcgtgagggaagtgttctttgaacgtgccaccattacagtgactcca
acaaagaaagggctccgtgaaattgatgaagcacatccttgttatgcaatgaagtatatc
aaaggtaaaccagtccgagatttaaagcaggaccaatttttgaaactgacgatggcagaa
gaagataagctgatcaatttggtgattggtgaccaaatcaaagggatcaccggagatact
tatgtggaggaagttgttcaactattcagcagagatgagtacagcaagcttgttcaagag
tggaacgacgtccgagcagaatgttgccaatttgcactggagaaactcttgtatccgatt
tttcgaaaagaattgagagcaaagttgttggatgaagccaaagaatatgtcattgacact
gctactcataaactgaacgaatggctcaaagttgcaccttactcggtcaattttgccgac
gaagatgaagaagactgggatactagtaaaggaattcgtgttttggcaattgcctacgtc
cccgattttagccaagcttccttcgccacagtgatttctcctgatggagagccatccgag
ttcattcgccttcaaaacatcatgaagagtctcaaagcctttaatgaatctgaccggaag
gataaatcagaagatttaaggtcaattaaggaattgatcgtcgcaaaaaagccacatgtg
gttgtgattggtggagaatcccgtgacgcaataatgattaaggaagacattcgaaatttg
attgccgaccttggcactgaggatggtttcccagcaatcaatgtagagattgtggataat
gagttggcgaaagtctatgctagctctattaaggctcagactgattttcgtgaatttcct
ctcatcttgagacaagcaatttctctcggtcgaaggatacaggacccactgattgaattt
tcgcaacttgtgaatcatgacgatgaaattatgtgcctaagatttcatcctatgcaggat
caagttgcaaaagaagaattgttggaaagtttatcaacacagtttgtgaatcgaacgaac
gaggtaggggttgacataaatcgctgcatttctagtccctttaccatgaacgtggcacag
tttatttgtggactgggacccaggaaagctacagcactcgttaagaccctgaaacaaaac
aaccagcggcttgaaaatcgaacccagcttatcacagtgtgtcacatgggacctaaaata
ttcattaattgctccggctttatcaaaattgacaccaattctcttggggacagtacggaa
gcctacgttgaagtattggatggctccagagtgcaccctgaaacttatgaatgggcccgt
aaaatggccgtggatgctttagagtacgacgacgaagatgcaaaccctgccagtgcacta
gaagaaattctggaaaccccagatcggttggaagagctgaacttggatgcttttgctgaa
gaattggaacgtcagggtttcgggaacaagagcattactctttacgacatccgtgctgaa
ctcaatgaccgttacaaggatcacagagaacactacacgactccgaatgctgagcagctt
ttcaacatgctcacgaaagagacaccagagacgttgtacaatggaaaacttacgactgcc
accgttgtcggtgtatcgcacaagaagccacaaggagagcaactcgacaatgcaatccca
gttagaaatgaagagacgggaatgtggcagtgtgcattctgcatgaaaaatgactttcct
gatttatctgaggtttggaatcattttgatgctggggcttgtcctggtcaagctactggg
ataagaatccgacttgataacggggtcagtggctttatcccaattgggaaattgtccgac
aaacctgtaactaatccggacgacagagtcaaacgtggtcaaactatacactgtagaatt
gtgaaaatagaagtggaccgattcagcgtagagtgcacatcacgaacgactgatctggtc
gacggtgaccaaaaatggagactgccaaaggatccatactatgacgccgaggctgaggat
aaggataagaaacaggaggaggaagtcaagaagaagaagcactatcaaacatatgtccgc
agggtcattgtacatccagcgttcaagaatatttcattcaaggagcttattcctataatg
gagacgatggatcagggcgatttgatcatacgaccctccagtaagggctcggaccacttg
actgtgacttggaaagttacagactccatttgtcaacatattgatgtgctagaaacaaag
aaggaaaacatgttcagtctcggtcggtcgttacacattggatcagaagaatatgaagac
ttggacgaaatttttgctcgttgcataaatcctatggcttccctctcacgagaattaatt
tcttccaagtattatgtgaagcatctgggtggaagtctagccatggcagatgaatatcta
aaagaggagaagaagaaaaactcaaataaaattcactatgttctgcatgccagcaaggaa
tttcccggaaaattcgtcctgtcgtatcttcctggaaacaaagttcagcatgaatacata
accgtcaatccatctggcttcagatatcgtcagcaatcattcgcaagtttaaatgcgcta
ttgaaatggttcaaggagcattacagggaagctccacccagcacacccatggccaccccg
acgaccaacattgctcgggcatctggcgcctctgcccaacatggcactcttgttccacca
ccaccaccatccagccactttgccgcaacattacgtactactccacattacaccactcca
acacaagggttgactccatattctgcattcactactaatacgccatacacaccaacagcc
cagactccacatattactccgtaccaaaccccttatcaaggaactccgtggcagtccgat
ccacaaaccagggctctatttttacattcttctgatggtttcaaaaacccgggacagaag
ccgcaagcaaatacgatacgagtatccagagacgcacaacctaatgatgatggcagtgat
tggcgtaaagctgcagatgcgtgggcaaagtcacaacagcatcgcccacaacgaccacca
gattctcagagatatactgacaaccccaacttacaaccactcggctcaaggcagcatata
tcggaccaggctttacgaagcagtatgctacaattccgtcaaacagtagaaggacttcga
ggagatcagcatgcacatggatcatccgcactgaattttcttccaaatccttccccccga
tctggacgtgatagtttgaaatccactccgcgtacaaactttagcccccgatcaatggtc
gaaagctcgctgggcgatgaaacaccgcttcatgatgaaaattaa
DBGET
integrated database retrieval system
